RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where bioproject = "PRJNA404067", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Absconditibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Absconditibacteriota · 6 ✖

tax_clade 1

  • Bacteria candidate phyla · 6 ✖

bioproject 1

  • PRJNA404067 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28212188 28212188 PRJNA404067_P_NODE_42146_length_188_cov_2.417323_g41759_i0 PRJNA404067 42146 188 2.417323 4.54456724 Candidatus Absconditabacterales bacterium 2927939 Bacteria Bacteria 97.4 4.26e-25   NR HNG96752.1 2927939 g41759 i0 95.9 0.781914893617021 49 2 78.2 0 42 188 4 52 HNG96752.1 hypothetical protein [Candidatus Absconditabacterales bacterium] diamond 147 97.4 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales     Candidatus Absconditabacterales bacterium
29412147 29412147 PRJNA404067_P_NODE_23249_length_227_cov_3.114458_g22862_i0 PRJNA404067 23249 227 3.114458 7.06981966 Candidatus Absconditabacterales bacterium 2927939 Bacteria Bacteria 105 2.37e-24   NR HNG96687.1 2927939 g22862 i0 72.7 1.01762114537445 77 19 99.1 1 226 2 283 359 HNG96687.1 hypothetical protein [Candidatus Absconditabacterales bacterium] diamond 231 105 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales     Candidatus Absconditabacterales bacterium
31212446 31212446 PRJNA404067_P_NODE_39515_length_199_cov_3.181159_g39128_i0 PRJNA404067 39515 199 3.181159 6.33050641 Candidatus Absconditabacterales bacterium 2927939 Bacteria Bacteria 123 7.91e-31   NR HNG96749.1 2927939 g39128 i0 92.4 0.994974874371859 66 5 99.5 0 2 199 145 210 HNG96749.1 hypothetical protein [Candidatus Absconditabacterales bacterium] diamond 198 123 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales     Candidatus Absconditabacterales bacterium
32003731 32003731 PRJNA404067_P_NODE_32498_length_207_cov_2.205479_g32111_i0 PRJNA404067 32498 207 2.205479 4.56534153 Candidatus Absconditabacterales bacterium 2927939 Bacteria Bacteria 109 8.44e-28   NR HNG96753.1 2927939 g32111 i0 96.4 0.811594202898551 56 2 81.2 0 169 2 145 200 HNG96753.1 hypothetical protein [Candidatus Absconditabacterales bacterium] diamond 168 109 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales     Candidatus Absconditabacterales bacterium
32225253 32225253 PRJNA404067_P_NODE_40878_length_193_cov_2.386364_g40491_i0 PRJNA404067 40878 193 2.386364 4.60568252 Candidatus Absconditabacterales bacterium 2927939 Bacteria Bacteria 104 3.819999999999999e-24   NR HNG96687.1 2927939 g40491 i0 83.1 0.917098445595855 59 10 91.7 0 177 1 396 454 HNG96687.1 hypothetical protein [Candidatus Absconditabacterales bacterium] diamond 177 104 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales     Candidatus Absconditabacterales bacterium
32573432 32573432 PRJNA404067_P_NODE_37179_length_202_cov_1.709220_g36792_i0 PRJNA404067 37179 202 1.70922 3.4526244 Candidatus Absconditabacterales bacterium 2927939 Bacteria Bacteria 74.3 1.6e-13   NR HNG96749.1 2927939 g36792 i0 89.2 0.54950495049505 37 4 55 0 112 2 1 37 HNG96749.1 hypothetical protein [Candidatus Absconditabacterales bacterium] diamond 111 74.3 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales     Candidatus Absconditabacterales bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;