contig_metadata
8 rows where bioproject = "PRJNA401346" and tax_phylum = "Chytridiomycota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3631922 | 3631922 | PRJNA401346_P_NODE_3783_length_270_cov_4.799043_g3762_i0 | PRJNA401346 | 3783 | 270 | 4.799043 | 12.9574161 | Fungi | 4751 | Fungi | Fungi | 121 | 6.689999999999999e-23 | NTclustered | gi|2432138713|ref|XM_053107478.1| | 110093 | g3762 | i0 | 84.252 | 9.62962962962963 | 127 | 16 | 46 | 3 | 6 | 130 | 24 | 148 | Polychytrium aggregatum large subunit ribosomal protein 29 (BJ171DRAFT_421272), partial mRNA | blastn | 2600 | 122 | 0.991803278688525 | Eukaryota | Opisthokonta | Fungi | Chytridiomycota | Chytridiomycetes | Polychytriales | Polychytrium | Polychytrium aggregatum | ||
| 5517907 | 5517907 | PRJNA401346_P_NODE_1425_length_400_cov_1.238938_g1404_i0 | PRJNA401346 | 1425 | 400 | 1.238938 | 4.955752 | Polychytrium aggregatum | 110093 | Fungi | Fungi | 187 | 1.0099999999999999e-42 | NTclustered | gi|2432157378|ref|XM_053107751.1| | 110093 | g1404 | i0 | 76.438 | 3.6425 | 365 | 75 | 90 | 9 | 7 | 364 | 547 | 187 | Polychytrium aggregatum ribosomal protein L6, alpha-beta domain-containing protein (BJ171DRAFT_426015), partial mRNA | blastn | 1457 | 187 | 1 | Eukaryota | Opisthokonta | Fungi | Chytridiomycota | Chytridiomycetes | Polychytriales | Polychytrium | Polychytrium aggregatum | ||
| 24640536 | 24640536 | PRJNA401346_P_NODE_1680_length_375_cov_4.308917_g1659_i0 | PRJNA401346 | 1680 | 375 | 4.308917 | 16.15843875 | Fungi | 4751 | Fungi | Fungi | 139 | 3.26e-40 | NR | XP_052971640.1 | 110093 | g1659 | i0 | 77.9 | 20.248 | 86 | 19 | 68.8 | 0 | 355 | 98 | 4 | 89 | XP_052971640.1 60S ribosomal protein L37 [Polychytrium aggregatum] | diamond | 7593 | 140 | 0.992857142857143 | Eukaryota | Opisthokonta | Fungi | Chytridiomycota | Chytridiomycetes | Polychytriales | Polychytrium | Polychytrium aggregatum | ||
| 25307238 | 25307238 | PRJNA401346_P_NODE_1940_length_354_cov_1.225256_g1919_i0 | PRJNA401346 | 1940 | 354 | 1.225256 | 4.33740624 | Opisthokonta | 33154 | Fungi | Fungi | 95.9 | 4.82e-22 | NR | KAI9031166.1 | 82268 | g1919 | i0 | 62.2 | 3.6271186440678 | 74 | 25 | 61 | 2 | 2 | 217 | 85 | 157 | KAI9031166.1 putative ubiquitin/ribosomal protein S27a fusion protein [Hyaloraphidium curvatum] | diamond | 1284 | 95.9 | 1 | Eukaryota | Opisthokonta | Fungi | Chytridiomycota | Monoblepharidomycetes | Monoblepharidales | Hyaloraphidium | Hyaloraphidium curvatum | ||
| 27976503 | 27976503 | PRJNA401346_P_NODE_6805_length_207_cov_1.753425_g6784_i0 | PRJNA401346 | 6805 | 207 | 1.753425 | 3.62958975 | Rhizophydiales | 451442 | Fungi | Fungi | 98.6 | 8.1e-23 | NR | KAJ3081187.1 | 2654861 | g6784 | i0 | 73.8 | 11.768115942029 | 61 | 16 | 88.4 | 0 | 3 | 185 | 210 | 270 | KAJ3081187.1 Guanine nucleotide-binding protein subunit beta-2-like 1 [Quaeritorhiza haematococci] | diamond | 2436 | 98.6 | 1 | Eukaryota | Opisthokonta | Fungi | Chytridiomycota | Chytridiomycetes | Quaeritorhizaceae | Quaeritorhiza | Quaeritorhiza haematococci | ||
| 29949113 | 29949113 | PRJNA401346_P_NODE_7811_length_204_cov_0.895105_g7790_i0 | PRJNA401346 | 7811 | 204 | 0.895105 | 1.8260142 | Rhizophlyctis rosea | 64517 | Fungi | Fungi | 54.3 | 8.74e-7 | NR | KAJ3036186.1 | 64517 | g7790 | i0 | 54.7 | 3.08823529411765 | 53 | 21 | 77.9 | 2 | 200 | 42 | 141 | 190 | KAJ3036186.1 Ubiquitin carboxyl-terminal hydrolase isozyme L3, partial [Rhizophlyctis rosea] | diamond | 630 | 54.3 | 1 | Eukaryota | Opisthokonta | Fungi | Chytridiomycota | Chytridiomycetes | Rhizophlyctidales | Rhizophlyctidaceae | Rhizophlyctis | Rhizophlyctis rosea | |
| 31197563 | 31197563 | PRJNA401346_P_NODE_7535_length_205_cov_0.888889_g7514_i0 | PRJNA401346 | 7535 | 205 | 0.888889 | 1.82222245 | Fungi | 4751 | Fungi | Fungi | 112 | 4.92e-27 | NR | KAJ3402983.1 | 4814 | g7514 | i0 | 67.6 | 11.9414634146341 | 68 | 22 | 99.5 | 0 | 204 | 1 | 289 | 356 | KAJ3402983.1 pre-mRNA-processing factor 17 [Chytriomyces hyalinus] | diamond | 2448 | 112 | 1 | Eukaryota | Opisthokonta | Fungi | Chytridiomycota | Chytridiomycetes | Chytridiales | Chytriomycetaceae | Chytriomyces | Chytriomyces hyalinus | |
| 31402811 | 31402811 | PRJNA401346_P_NODE_5956_length_215_cov_1.181818_g5935_i0 | PRJNA401346 | 5956 | 215 | 1.181818 | 2.5409087 | Synchytrium microbalum | 1806994 | Fungi | Fungi | 62 | 4.08e-9 | NR | XP_031026017.1 | 1806994 | g5935 | i0 | 52.2 | 8.83255813953488 | 67 | 27 | 86.5 | 2 | 214 | 29 | 379 | 445 | XP_031026017.1 uncharacterized protein SmJEL517_g02067 [Synchytrium microbalum] | diamond | 1899 | 62 | 1 | Eukaryota | Opisthokonta | Fungi | Chytridiomycota | Chytridiomycetes | Synchytriales | Synchytriaceae | Synchytrium | Synchytrium microbalum |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;