RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJNA401346" and tax_kingdom = "Shotokuvirae"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Shotokuvirae · 10 ✖

bioproject 1

  • PRJNA401346 · 10 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8067473 8067473 PRJNA401346_P_NODE_1707_length_373_cov_1.230769_g1686_i0 PRJNA401346 1707 373 1.230769 4.59076837 Genomoviridae sp. 2202565 Viruses Viruses 379 1.43e-100   NTclustered gi|1832329329|gb|MT309858.1| 2202565 g1686 i0 85.638 3.35120643431635 376 36 100 11 1 373 727 1087 MAG: Genomoviridae sp. isolate 6434_413, complete genome blastn 1250 379 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
8067483 8067483 PRJNA401346_P_NODE_2127_length_342_cov_0.811388_g2106_i0 PRJNA401346 2127 342 0.811388 2.77494696 Genomoviridae sp. 2202565 Viruses Viruses 322 2.23e-83   NTclustered gi|1832329329|gb|MT309858.1| 2202565 g2106 i0 83.929 1.94152046783626 336 54 98 0 7 342 407 72 MAG: Genomoviridae sp. isolate 6434_413, complete genome blastn 664 322 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
22090701 22090701 PRJNA401346_P_NODE_458_length_679_cov_1.058252_g439_i0 PRJNA401346 458 679 1.058252 7.18553108 Genomoviridae sp. 2202565 Viruses Viruses 1053 0   NTclustered gi|1832329329|gb|MT309858.1| 2202565 g439 i0 94.868 22.3740795287187 682 22 99 2 1 669 1124 1805 MAG: Genomoviridae sp. isolate 6434_413, complete genome blastn 15192 1053 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
22090800 22090800 PRJNA401346_P_NODE_7718_length_204_cov_1.244755_g7697_i0 PRJNA401346 7718 204 1.244755 2.5393002 Cressdnaviricota sp. 2748378 Viruses Viruses 219 1.66e-52   NTclustered gi|2896100955|gb|PQ792342.1| 2748378 g7697 i0 98.4 0.985294117647059 125 0 75 1 31 153 2 126 MAG: Cressdnaviricota sp. isolate SbovineF090_cress11 genomic sequence blastn 201 219 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
22090809 22090809 PRJNA401346_P_NODE_78_length_1419_cov_4.519882_g71_i0 PRJNA401346 78 1419 4.519882 64.13712558 Pavo cristatus CRESS-DNA-virus sp. 2815049 Viruses Viruses 166 2.26e-44   NR QTE03529.1 2815049 g71 i0 43.5 0.408033826638478 193 108 40.6 1 18 593 61 253 QTE03529.1 MAG: capsid protein [Pavo cristatus CRESS-DNA-virus sp.] diamond 579 166 1 Viruses   Shotokuvirae Cressdnaviricota         Pavo cristatus CRESS-DNA-virus sp.
27043811 27043811 PRJNA401346_P_NODE_5462_length_227_cov_1.156627_g5441_i0 PRJNA401346 5462 227 1.156627 2.62554329 Cressdnaviricota sp. 2748378 Viruses Viruses 67.4 1.88e-11   NR UOF80228.1 2748378 g5441 i0 52.3 0.859030837004405 65 30 85.9 1 217 23 67 130 UOF80228.1 capsid protein [Cressdnaviricota sp.] diamond 195 67.4 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
27850102 27850102 PRJNA401346_P_NODE_4424_length_253_cov_1.307292_g4403_i0 PRJNA401346 4424 253 1.307292 3.30744876 root 1 Root_unresolved Root_unresolved 60.8 1.05e-8   NR WAE42348.1 2748378 g4403 i0 48.1 1.24505928853755 52 27 61.7 0 248 93 208 259 WAE42348.1 MAG: capsid protein [Cressdnaviricota sp.] diamond 315 60.8 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
30170067 30170067 PRJNA401346_P_NODE_392_length_729_cov_2.633234_g377_i0 PRJNA401346 392 729 2.633234 19.19627586 Wigfec virus K19_555 2986010 Viruses Viruses 114 9.43e-27   NR UYD39120.1 2986010 g377 i0 38.4 2.09053497942387 164 99 66.7 2 200 685 24 187 UYD39120.1 MAG: capsid protein [Wigfec virus K19_555] diamond 1524 114 1 Viruses   Shotokuvirae Cressdnaviricota         Wigfec virus K19_555
31180929 31180929 PRJNA401346_P_NODE_4115_length_262_cov_0.955224_g4094_i0 PRJNA401346 4115 262 0.955224 2.50268688 Bovine faeces associated smacovirus 5 1843753 Viruses Viruses 76.3 4.66e-14   NR YP_009252317.1 1843753 g4094 i0 51.6 0.732824427480916 64 30 73.3 1 205 14 212 274 YP_009252317.1 putative capsid protein [Bovine faeces associated smacovirus 5] diamond 192 76.3 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Cremevirales Smacoviridae Drosmacovirus Drosmacovirus bovas1
32667515 32667515 PRJNA401346_P_NODE_4120_length_262_cov_0.925373_g4099_i0 PRJNA401346 4120 262 0.925373 2.42447726 Circoviridae sp. 1954248 Viruses Viruses 119 7.85e-32   NR AYP28764.1 1954248 g4099 i0 60.5 3.61832061068702 86 33 98.5 1 260 3 27 111 AYP28764.1 MAG: helicase [Circoviridae sp.] diamond 948 119 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Rohanvirales Nenyaviridae Galvornvirus Galvornvirus isengard

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;