RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA401346", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA401346 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16383486 16383486 PRJNA401346_P_NODE_2193_length_338_cov_0.740072_g2172_i0 PRJNA401346 2193 338 0.740072 2.50144336 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 207 6.44e-49   NTclustered gi|385158752|gb|JQ272290.1| 365352 g2172 i0 84.018 64.5798816568047 219 31 64 4 1 218 1237 1022 Soleneiscus stolonifer voucher QM G313668 28S ribosomal RNA gene, partial sequence blastn 21828 209 0.990430622009569 Eukaryota Opisthokonta Metazoa Porifera Calcarea Clathrinida Dendyidae Soleneiscus Soleneiscus stolonifer
27707688 27707688 PRJNA401346_P_NODE_1104_length_447_cov_1.740933_g1083_i0 PRJNA401346 1104 447 1.740933 7.78197051 Oscarella lobularis 121494 Porifera other_Eukaryota 195 1.59e-61   NR XP_065826293.1 121494 g1083 i0 73.1 11.3691275167785 130 35 87.2 0 12 401 1 130 XP_065826293.1 small ribosomal subunit protein uS8 [Oscarella lobularis] diamond 5082 195 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;