RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA401346", tax_clade = "Opisthokonta" and tax_phylum = "Zoopagomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA401346 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2965111 2965111 PRJNA401346_P_NODE_8623_length_201_cov_1.371429_g8602_i0 PRJNA401346 8623 201 1.371429 2.75657229 Linderina pennispora 61395 Fungi Fungi 124 3.6499999999999996e-24   NTclustered gi|2028324920|ref|XM_040888337.1| 61395 g8602 i0 89 4.97512437810945 100 11 50 0 28 127 304 403 Linderina pennispora uncharacterized protein (DL89DRAFT_269536), partial mRNA blastn 1000 124 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
20815840 20815840 PRJNA401346_P_NODE_2937_length_299_cov_1.075630_g2916_i0 PRJNA401346 2937 299 1.07563 3.2161337 Fungi 4751 Fungi Fungi 159 1.47e-44   NR KAI8325671.1 61414 g2916 i0 73.7 20.8494983277592 99 26 99.3 0 1 297 319 417 KAI8325671.1 translation elongation factor 1-alpha [Martensiomyces pterosporus] diamond 6234 159 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Martensiomyces Martensiomyces pterosporus
26758788 26758788 PRJNA401346_P_NODE_2761_length_306_cov_1.624490_g2740_i0 PRJNA401346 2761 306 1.62449 4.9709394 Spiromyces aspiralis 68401 Fungi Fungi 130 2.26e-36   NR KAJ1675135.1 68401 g2740 i0 57.3 3.73529411764706 96 41 94.1 0 289 2 6 101 KAJ1675135.1 Protein component of the small (40S) ribosomal subunit [Spiromyces aspiralis] diamond 1143 130 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Spiromyces Spiromyces aspiralis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;