RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA400391" and tax_phylum = "Tardigrada"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Tardigrada · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA400391 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3631845 3631845 PRJNA400391_S_NODE_2983_length_233_cov_5.116162_g2922_i0 PRJNA400391 2983 233 5.116162 11.92065746 Isohypsibiidae 2562671 Tardigrada other_Eukaryota 368 1.82e-97   NTclustered gi|1596161858|gb|MK675934.1| 2558947 g2922 i0 95.299 100.480686695279 234 8 100 3 1 233 788 1019 Ursulinius pappi voucher Urs_pap small subunit ribosomal RNA gene, partial sequence blastn 23412 368 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Isohypsibiidae Ursulinius Ursulinius pappi
4241207 4241207 PRJNA400391_S_NODE_5744_length_164_cov_1.899225_g5683_i0 PRJNA400391 5744 164 1.899225 3.114729 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 169 1.3000000000000001e-37   NTclustered gi|2493507836|ref|XR_008692101.1| 2943436 g5683 i0 85.629 20.8231707317073 167 17 99 6 1 163 3712 3549 PREDICTED: Paramacrobiotus metropolitanus large subunit ribosomal RNA (LOC129600602), rRNA blastn 3415 169 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
23366183 23366183 PRJNA400391_S_NODE_4899_length_180_cov_1.172414_g4838_i0 PRJNA400391 4899 180 1.172414 2.1103452 Hypsibius convergens 576298 Tardigrada other_Eukaryota 305 1.06e-78   NTclustered gi|216963373|gb|FJ435772.1| 576298 g4838 i0 97.74 8.9 177 4 98 0 4 180 200 24 Hypsibius convergens isolate Tar181 28S ribosomal RNA gene, partial sequence blastn 1602 305 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Hypsibiidae Hypsibius Hypsibius convergens

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;