RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA400391", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Kitrinoviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA400391 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11892935 11892935 PRJNA400391_S_NODE_5790_length_163_cov_2.296875_g5729_i0 PRJNA400391 5790 163 2.296875 3.74390625 Ripocalt virus 3130345 Viruses Viruses 224 2.72e-54   NTclustered gi|2717319477|gb|PP172647.1| 3130345 g5729 i0 91.411 26.3865030674847 163 14 100 0 1 163 171 9 MAG: Ripocalt virus isolate KCAP1_k141_19090 genomic sequence blastn 4301 224 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Tymoviridae   Ripocalt virus
22090482 22090482 PRJNA400391_S_NODE_2118_length_273_cov_67.907563_g2057_i0 PRJNA400391 2118 273 67.907563 185.38764699 Sopozig virus 3131662 Viruses Viruses 448 2.7399999999999995e-121   NTclustered gi|2717323079|gb|PP173963.1| 3131662 g2057 i0 97.692 260.527472527473 260 6 95 0 1 260 329 588 MAG: Sopozig virus isolate SP1B_k141_130621 genomic sequence blastn 71124 448 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Sopozig virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;