contig_metadata
10 rows where bioproject = "PRJNA400391" and tax_phylum = "Fibrobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1688867 | 1688867 | PRJNA400391_S_NODE_2202_length_269_cov_3.286325_g2141_i0 | PRJNA400391 | 2202 | 269 | 3.286325 | 8.84021425 | Fibrobacterota bacterium | 2052160 | Bacteria | Bacteria | 359 | 1.3e-94 | NTclustered | gi|1958056460|gb|CP064986.1| | 2052160 | g2141 | i0 | 91.078 | 181.468401486989 | 269 | 18 | 99 | 5 | 3 | 269 | 2061026 | 2060762 | Fibrobacteres bacterium isolate Fred_18-Q3-R57-64_MAXAC.109_cln chromosome, complete genome | blastn | 48815 | 359 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacterota bacterium | |||||
| 4241099 | 4241099 | PRJNA400391_S_NODE_1444_length_315_cov_24.667857_g1383_i0 | PRJNA400391 | 1444 | 315 | 24.667857 | 77.70374955 | Fibrobacterota bacterium | 2052160 | Bacteria | Bacteria | 427 | 4.1899999999999985e-115 | NTclustered | gi|1958056460|gb|CP064986.1| | 2052160 | g1383 | i0 | 91.167 | 271.955555555556 | 317 | 24 | 100 | 2 | 1 | 315 | 2981428 | 2981742 | Fibrobacteres bacterium isolate Fred_18-Q3-R57-64_MAXAC.109_cln chromosome, complete genome | blastn | 85666 | 427 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacterota bacterium | |||||
| 8067439 | 8067439 | PRJNA400391_S_NODE_5787_length_163_cov_2.445312_g5726_i0 | PRJNA400391 | 5787 | 163 | 2.445312 | 3.98585856 | Fibrobacterota bacterium | 2052160 | Bacteria | Bacteria | 213 | 5.89e-51 | NTclustered | gi|1958056460|gb|CP064986.1| | 2052160 | g5726 | i0 | 90.361 | 143.374233128834 | 166 | 10 | 100 | 5 | 1 | 163 | 2981099 | 2980937 | Fibrobacteres bacterium isolate Fred_18-Q3-R57-64_MAXAC.109_cln chromosome, complete genome | blastn | 23370 | 213 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacterota bacterium | |||||
| 11892820 | 11892820 | PRJNA400391_S_NODE_1050_length_353_cov_10.622642_g989_i0 | PRJNA400391 | 1050 | 353 | 10.622642 | 37.49792626 | uncultured Fibrobacteria bacterium | 1758207 | Bacteria | Bacteria | 387 | 8.06e-103 | NTclustered | gi|2874253984|emb|OY970309.1| | 1758207 | g989 | i0 | 86.782 | 194.133144475921 | 348 | 44 | 98 | 2 | 1 | 346 | 1595518 | 1595865 | MAG: uncultured Fibrobacteria bacterium isolate MFD05502.bin.1.3 genome assembly, chromosome: 1 | blastn | 68529 | 387 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacteria | uncultured Fibrobacteria bacterium | ||||
| 11892860 | 11892860 | PRJNA400391_S_NODE_2690_length_244_cov_6.244019_g2629_i0 | PRJNA400391 | 2690 | 244 | 6.244019 | 15.23540636 | uncultured Fibrobacteria bacterium | 1758207 | Bacteria | Bacteria | 226 | 1.23e-54 | NTclustered | gi|2874253984|emb|OY970309.1| | 1758207 | g2629 | i0 | 89.56 | 96.4631147540984 | 182 | 14 | 73 | 5 | 66 | 244 | 1594270 | 1594449 | MAG: uncultured Fibrobacteria bacterium isolate MFD05502.bin.1.3 genome assembly, chromosome: 1 | blastn | 23537 | 226 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacteria | uncultured Fibrobacteria bacterium | ||||
| 15716836 | 15716836 | PRJNA400391_S_NODE_593_length_426_cov_9.951407_g533_i0 | PRJNA400391 | 593 | 426 | 9.951407 | 42.39299382 | uncultured Fibrobacteria bacterium | 1758207 | Bacteria | Bacteria | 444 | 5.799999999999998e-120 | NTclustered | gi|2874253984|emb|OY970309.1| | 1758207 | g533 | i0 | 86.7 | 190.023474178404 | 406 | 47 | 94 | 7 | 25 | 426 | 1595465 | 1595063 | MAG: uncultured Fibrobacteria bacterium isolate MFD05502.bin.1.3 genome assembly, chromosome: 1 | blastn | 80950 | 444 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacteria | uncultured Fibrobacteria bacterium | ||||
| 15716850 | 15716850 | PRJNA400391_S_NODE_673_length_405_cov_2.910811_g613_i0 | PRJNA400391 | 673 | 405 | 2.910811 | 11.78878455 | Fibrobacterota bacterium | 2052160 | Bacteria | Bacteria | 531 | 4.09e-146 | NTclustered | gi|1958056460|gb|CP064986.1| | 2052160 | g613 | i0 | 91.206 | 133.03950617284 | 398 | 24 | 97 | 11 | 13 | 405 | 2061351 | 2061742 | Fibrobacteres bacterium isolate Fred_18-Q3-R57-64_MAXAC.109_cln chromosome, complete genome | blastn | 53881 | 531 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacterota bacterium | |||||
| 16383460 | 16383460 | PRJNA400391_S_NODE_4933_length_179_cov_1.736111_g4872_i0 | PRJNA400391 | 4933 | 179 | 1.736111 | 3.10763869 | Fibrobacter | 832 | Bacteria | Bacteria | 198 | 1.84e-46 | NTclustered | gi|470485271|ref|NR_076693.1| | 834 | g4872 | i0 | 87.429 | 363.664804469274 | 175 | 18 | 96 | 4 | 1 | 172 | 521 | 694 | Fibrobacter succinogenes subsp. succinogenes strain S85 23S ribosomal RNA gene, complete sequence | blastn | 65096 | 198 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacteria | Fibrobacterales | Fibrobacteraceae | Fibrobacter | Fibrobacter succinogenes | |
| 20815670 | 20815670 | PRJNA400391_S_NODE_1277_length_330_cov_4.311864_g1216_i0 | PRJNA400391 | 1277 | 330 | 4.311864 | 14.2291512 | uncultured Fibrobacteria bacterium | 1758207 | Bacteria | Bacteria | 248 | 3.69e-61 | NTclustered | gi|2874253984|emb|OY970309.1| | 1758207 | g1216 | i0 | 83.456 | 209.969696969697 | 272 | 39 | 82 | 6 | 60 | 328 | 1594219 | 1593951 | MAG: uncultured Fibrobacteria bacterium isolate MFD05502.bin.1.3 genome assembly, chromosome: 1 | blastn | 69290 | 248 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacteria | uncultured Fibrobacteria bacterium | ||||
| 22090602 | 22090602 | PRJNA400391_S_NODE_778_length_385_cov_292.114286_g717_i0 | PRJNA400391 | 778 | 385 | 292.114286 | 1124.6400011 | uncultured Fibrobacteria bacterium | 1758207 | Bacteria | Bacteria | 536 | 8.319999999999999e-148 | NTclustered | gi|2874253984|emb|OY970309.1| | 1758207 | g717 | i0 | 91.731 | 521.433766233766 | 387 | 30 | 100 | 2 | 1 | 385 | 1596574 | 1596188 | MAG: uncultured Fibrobacteria bacterium isolate MFD05502.bin.1.3 genome assembly, chromosome: 1 | blastn | 200752 | 536 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacteria | uncultured Fibrobacteria bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;