contig_metadata
13 rows where bioproject = "PRJNA400391", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 414010 | 414010 | PRJNA400391_S_NODE_3081_length_229_cov_3.489691_g3020_i0 | PRJNA400391 | 3081 | 229 | 3.489691 | 7.99139239 | Desulfococcus multivorans | 897 | Bacteria | Bacteria | 303 | 5.11e-78 | NTclustered | gi|1092202713|gb|CP015381.1| | 897 | g3020 | i0 | 96.703 | 197.03056768559 | 182 | 6 | 79 | 0 | 48 | 229 | 148044 | 147863 | Desulfococcus multivorans strain DSM 2059 chromosome, complete genome | blastn | 45120 | 303 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfococcaceae | Desulfococcus | Desulfococcus multivorans | ||
| 414028 | 414028 | PRJNA400391_S_NODE_3741_length_208_cov_4.843931_g3680_i0 | PRJNA400391 | 3741 | 208 | 4.843931 | 10.07537648 | Candidatus Electronema halotolerans | 3036122 | Bacteria | Bacteria | 159 | 1.04e-34 | NTclustered | gi|2322424479|emb|OW818675.1| | 3036122 | g3680 | i0 | 86.486 | 68.5769230769231 | 148 | 16 | 70 | 3 | 1 | 146 | 2404305 | 2404160 | Candidatus Electronema halotolerans isolate LOGT-cMAG genome assembly, chromosome: 1 | blastn | 14264 | 159 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Candidatus Electronema | Candidatus Electronema halotolerans | ||
| 7458951 | 7458951 | PRJNA400391_S_NODE_1966_length_281_cov_469.918699_g1905_i0 | PRJNA400391 | 1966 | 281 | 469.918699 | 1320.47154419 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 324 | 4.97e-84 | NTclustered | gi|779731694|gb|CP010430.1| | 35554 | g1905 | i0 | 88.476 | 241.79359430605 | 269 | 30 | 95 | 1 | 14 | 281 | 2785241 | 2784973 | Geobacter sulfurreducens strain AM-1 genome | blastn | 67944 | 327 | 0.990825688073395 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter sulfurreducens | ||
| 8067442 | 8067442 | PRJNA400391_S_NODE_5927_length_161_cov_1.841270_g5866_i0 | PRJNA400391 | 5927 | 161 | 1.84127 | 2.9644447 | Desulfococcus multivorans | 897 | Bacteria | Bacteria | 298 | 1.56e-76 | NTclustered | gi|1092202713|gb|CP015381.1| | 897 | g5866 | i0 | 100 | 294.018633540373 | 161 | 0 | 100 | 0 | 1 | 161 | 145321 | 145161 | Desulfococcus multivorans strain DSM 2059 chromosome, complete genome | blastn | 47337 | 298 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfococcaceae | Desulfococcus | Desulfococcus multivorans | ||
| 9342244 | 9342244 | PRJNA400391_S_NODE_3648_length_211_cov_3.522727_g3587_i0 | PRJNA400391 | 3648 | 211 | 3.522727 | 7.43295397 | Geobacter benzoatilyticus | 2815309 | Bacteria | Bacteria | 154 | 4.94e-33 | NTclustered | gi|2004017374|gb|CP071382.1| | 2815309 | g3587 | i0 | 80.374 | 69.9905213270142 | 214 | 33 | 99 | 8 | 3 | 211 | 489813 | 490022 | Geobacter benzoatilyticus strain Jerry-YX chromosome, complete genome | blastn | 14768 | 154 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter benzoatilyticus | ||
| 10618027 | 10618027 | PRJNA400391_S_NODE_5329_length_171_cov_3.360294_g5268_i0 | PRJNA400391 | 5329 | 171 | 3.360294 | 5.74610274 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 209 | 8.03e-50 | NTclustered | gi|2893358418|emb|OZ220710.1| | 2202153 | g5268 | i0 | 89.82 | 100.286549707602 | 167 | 11 | 96 | 4 | 1 | 164 | 2289670 | 2289507 | MAG: Thermodesulfobacteriota bacterium isolate dce1034a-8f23-488c-aa07-39e6c80a0035 genome assembly, chromosome: 1 | blastn | 17149 | 209 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 11284318 | 11284318 | PRJNA400391_S_NODE_2649_length_246_cov_3.530806_g2588_i0 | PRJNA400391 | 2649 | 246 | 3.530806 | 8.68578276 | Geomonas | 2651583 | Bacteria | Bacteria | 357 | 4.1999999999999997e-94 | NTclustered | gi|2233265061|gb|CP096574.1| | 2740185 | g2588 | i0 | 93.089 | 184.020325203252 | 246 | 14 | 99 | 3 | 2 | 245 | 885189 | 884945 | Geomonas paludis strain RG22 chromosome, complete genome | blastn | 45269 | 357 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geomonas | Geomonas paludis | ||
| 14442994 | 14442994 | PRJNA400391_S_NODE_3052_length_230_cov_6.723077_g2991_i0 | PRJNA400391 | 3052 | 230 | 6.723077 | 15.4630771 | Desulfarculia bacterium | 3065862 | Bacteria | Bacteria | 115 | 2.58e-21 | NTclustered | gi|2621702698|emb|OY759590.1| | 3065862 | g2991 | i0 | 84 | 87.6739130434783 | 125 | 14 | 53 | 6 | 110 | 230 | 337014 | 336892 | MAG: Desulfarculia bacterium isolate 49400898-fc5b-42b7-bef8-a303f8702bb8 genome assembly, chromosome: 1 | blastn | 20165 | 115 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfarculia | Desulfarculia bacterium | |||||
| 16383395 | 16383395 | PRJNA400391_S_NODE_1133_length_345_cov_158.312903_g1072_i0 | PRJNA400391 | 1133 | 345 | 158.312903 | 546.17951535 | Thermodesulfobacteriota | 200940 | Bacteria | Bacteria | 473 | 5.879999999999999e-129 | NTclustered | gi|470477500|ref|NR_076387.1| | 19 | g1072 | i0 | 91.988 | 273.869565217391 | 337 | 27 | 98 | 0 | 9 | 345 | 2292 | 2628 | Pelobacter carbinolicus strain Gra Bd 1 23S ribosomal RNA gene, complete sequence | blastn | 94485 | 473 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Syntrophotaleaceae | Syntrophotalea | Syntrophotalea carbinolica | ||
| 18932561 | 18932561 | PRJNA400391_S_NODE_5515_length_168_cov_3.428571_g5454_i0 | PRJNA400391 | 5515 | 168 | 3.428571 | 5.75999928 | Candidatus Electrothrix | 1859128 | Bacteria | Bacteria | 108 | 2.97e-19 | NTclustered | gi|2755823080|gb|CP159373.1| | 3062594 | g5454 | i0 | 85.577 | 296.964285714286 | 104 | 14 | 62 | 1 | 64 | 167 | 143032 | 143134 | MAG: Candidatus Electrothrix aestuarii isolate Rat1 chromosome, complete genome | blastn | 49890 | 108 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Candidatus Electrothrix | Candidatus Electrothrix aestuarii | ||
| 20815764 | 20815764 | PRJNA400391_S_NODE_5357_length_171_cov_1.227941_g5296_i0 | PRJNA400391 | 5357 | 171 | 1.227941 | 2.09977911 | Desulfarculaceae bacterium | 2528248 | Bacteria | Bacteria | 113 | 6.480000000000001e-21 | NTclustered | gi|2621780225|emb|OY776512.1| | 2528248 | g5296 | i0 | 81.379 | 111.93567251462 | 145 | 22 | 84 | 5 | 1 | 144 | 4510135 | 4509995 | MAG: Desulfarculaceae bacterium isolate e2237022-3439-453f-a1e0-3d3180ebaa11 genome assembly, chromosome: 1 | blastn | 19141 | 113 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfarculia | Desulfarculales | Desulfarculaceae | Desulfarculaceae bacterium | |||
| 23366186 | 23366186 | PRJNA400391_S_NODE_4999_length_177_cov_2.239437_g4938_i0 | PRJNA400391 | 4999 | 177 | 2.239437 | 3.96380349 | Candidatus Electronema aureum | 2005002 | Bacteria | Bacteria | 156 | 1.11e-33 | NTclustered | gi|2322424202|emb|OW818638.1| | 2005002 | g4938 | i0 | 82.857 | 205.372881355932 | 175 | 29 | 98 | 1 | 1 | 174 | 1681 | 1855 | Candidatus Electronema aureum isolate ENR-cMAG genome assembly, chromosome: 1 | blastn | 36351 | 156 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Candidatus Electronema | Candidatus Electronema aureum | ||
| 25307207 | 25307207 | PRJNA400391_S_NODE_5100_length_175_cov_1.628571_g5039_i0 | PRJNA400391 | 5100 | 175 | 1.628571 | 2.84999925 | Nitratidesulfovibrio | 2802295 | Bacteria | Bacteria | 207 | 2.97e-49 | NTclustered | gi|2791413552|dbj|AP036014.1| | 2009266 | g5039 | i0 | 90.062 | 145.194285714286 | 161 | 14 | 91 | 2 | 7 | 166 | 226551 | 226710 | Nitratidesulfovibrio sp. HK-II DNA, complete genome | blastn | 25409 | 207 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Nitratidesulfovibrio | Nitratidesulfovibrio sp. HK-II |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;