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contig_metadata

13 rows where bioproject = "PRJNA400391" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA400391 · 13 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1688879 1688879 PRJNA400391_S_NODE_2722_length_243_cov_2.538462_g2661_i0 PRJNA400391 2722 243 2.538462 6.16846266 uncultured Methanocorpusculum sp. 176309 Archaea Archaea 449 6.65e-122   NTclustered gi|2621784620|emb|OY781078.1| 176309 g2661 i0 100 149.991769547325 243 0 100 0 1 243 399419 399177 MAG: uncultured Methanocorpusculum sp. isolate da2e5db0-0b8c-42b4-9ad7-c040378b94a4 genome assembly, chromosome: 1 blastn 36448 449 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum uncultured Methanocorpusculum sp.
2356440 2356440 PRJNA400391_S_NODE_1982_length_281_cov_4.605691_g1921_i0 PRJNA400391 1982 281 4.605691 12.94199171 Methanothrix 2222 Archaea Archaea 494 3.58e-135   NTclustered gi|507148322|ref|NR_103125.1| 2223 g1921 i0 98.566 15.0427046263345 279 4 99 0 1 279 104 382 Methanosaeta concilii strain GP6 23S ribosomal RNA gene, complete sequence blastn 4227 494 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii
7458989 7458989 PRJNA400391_S_NODE_4526_length_188_cov_1.666667_g4465_i0 PRJNA400391 4526 188 1.666667 3.13333396 Methanocorpusculum 2192 Archaea Archaea 342 8.539999999999999e-90   NTclustered gi|636559125|ref|NR_115182.1| 2193 g4465 i0 99.468 100 188 1 100 0 1 188 394 581 Methanocorpusculum parvum strain DSM 3823 16S ribosomal RNA, partial sequence blastn 18800 342 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum Methanocorpusculum parvum
7459015 7459015 PRJNA400391_S_NODE_6606_length_151_cov_1.448276_g6545_i0 PRJNA400391 6606 151 1.448276 2.18689676 Methanocorpusculum 2192 Archaea Archaea 241 2.4500000000000008e-59   NTclustered gi|470481509|ref|NR_076479.1| 83984 g6545 i0 95.395 156.112582781457 152 6 100 1 1 151 1941 1790 Methanocorpusculum labreanum strain Z 23S ribosomal RNA gene, complete sequence blastn 23573 241 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum Methanocorpusculum labreanum
8733818 8733818 PRJNA400391_S_NODE_1107_length_348_cov_1.961661_g1046_i0 PRJNA400391 1107 348 1.961661 6.82658028 Methanothrix 2222 Archaea Archaea 616 9.32e-172   NTclustered gi|507148322|ref|NR_103125.1| 2223 g1046 i0 98.563 238.729885057471 348 5 100 0 1 348 2615 2268 Methanosaeta concilii strain GP6 23S ribosomal RNA gene, complete sequence blastn 83078 616 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii
8733846 8733846 PRJNA400391_S_NODE_2987_length_233_cov_2.222222_g2926_i0 PRJNA400391 2987 233 2.222222 5.17777726 root 1 Root_unresolved Root_unresolved 388 1.4e-103   NTclustered gi|636559125|ref|NR_115182.1| 2193 g2926 i0 99.078 96.8583690987124 217 1 93 1 1 216 1111 895 Methanocorpusculum parvum strain DSM 3823 16S ribosomal RNA, partial sequence blastn 22568 388 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum Methanocorpusculum parvum
13167875 13167875 PRJNA400391_S_NODE_5051_length_176_cov_1.375887_g4990_i0 PRJNA400391 5051 176 1.375887 2.42156112 uncultured Methanocorpusculum sp. 176309 Archaea Archaea 320 3.69e-83   NTclustered gi|2621784620|emb|OY781078.1| 176309 g4990 i0 99.432 28.0454545454545 176 1 100 0 1 176 400303 400478 MAG: uncultured Methanocorpusculum sp. isolate da2e5db0-0b8c-42b4-9ad7-c040378b94a4 genome assembly, chromosome: 1 blastn 4936 320 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum uncultured Methanocorpusculum sp.
15108820 15108820 PRJNA400391_S_NODE_5092_length_175_cov_1.821429_g5031_i0 PRJNA400391 5092 175 1.821429 3.18750075 Methanothrix 2222 Archaea Archaea 307 2.8500000000000004e-79   NTclustered gi|507148322|ref|NR_103125.1| 2223 g5031 i0 98.295 32.2 176 2 100 1 1 175 1195 1370 Methanosaeta concilii strain GP6 23S ribosomal RNA gene, complete sequence blastn 5635 307 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii
15108834 15108834 PRJNA400391_S_NODE_6272_length_156_cov_1.876033_g6211_i0 PRJNA400391 6272 156 1.876033 2.92661148 Methanocorpusculum 2192 Archaea Archaea 283 4.1899999999999994e-72   NTclustered gi|470481509|ref|NR_076479.1| 83984 g6211 i0 99.359 49.6666666666667 156 1 100 0 1 156 2823 2668 Methanocorpusculum labreanum strain Z 23S ribosomal RNA gene, complete sequence blastn 7748 283 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum Methanocorpusculum labreanum
16383439 16383439 PRJNA400391_S_NODE_3613_length_212_cov_2.655367_g3552_i0 PRJNA400391 3613 212 2.655367 5.62937804 Methanothrix 2222 Archaea Archaea 377 2.71e-100   NTclustered gi|507148322|ref|NR_103125.1| 2223 g3552 i0 99.048 217.183962264151 210 2 99 0 1 210 1929 2138 Methanosaeta concilii strain GP6 23S ribosomal RNA gene, complete sequence blastn 46043 377 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii
18932520 18932520 PRJNA400391_S_NODE_2815_length_239_cov_2.852941_g2754_i0 PRJNA400391 2815 239 2.852941 6.81852899 Methanothrix 2222 Archaea Archaea 438 1.4099999999999996e-118   NTclustered gi|507148322|ref|NR_103125.1| 2223 g2754 i0 100 22.5899581589958 237 0 99 0 1 237 702 938 Methanosaeta concilii strain GP6 23S ribosomal RNA gene, complete sequence blastn 5399 438 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii
22758012 22758012 PRJNA400391_S_NODE_5578_length_167_cov_2.515152_g5517_i0 PRJNA400391 5578 167 2.515152 4.20030384 root 1 Root_unresolved Root_unresolved 307 2.71e-79   NTclustered gi|636559125|ref|NR_115182.1| 2193 g5517 i0 100 103.377245508982 166 0 99 0 1 166 674 839 Methanocorpusculum parvum strain DSM 3823 16S ribosomal RNA, partial sequence blastn 17264 307 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum Methanocorpusculum parvum
24032775 24032775 PRJNA400391_S_NODE_2699_length_244_cov_1.803828_g2638_i0 PRJNA400391 2699 244 1.803828 4.40134032 Methanothrix 2222 Archaea Archaea 401 1.8999999999999998e-107   NTclustered gi|507148322|ref|NR_103125.1| 2223 g2638 i0 96.327 14.6188524590164 245 7 100 2 1 244 587 344 Methanosaeta concilii strain GP6 23S ribosomal RNA gene, complete sequence blastn 3567 401 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;