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contig_metadata

11 rows where bioproject = "PRJNA400391" and tax_kingdom = "Fusobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Fusobacteriati · 11 ✖

bioproject 1

  • PRJNA400391 · 11 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
414051 414051 PRJNA400391_S_NODE_4661_length_185_cov_1.620000_g4600_i0 PRJNA400391 4661 185 1.62 2.997 Leptotrichia sp. oral taxon 221 712362 Bacteria Bacteria 315 1.8199999999999998e-81   NTclustered gi|2028889048|gb|CP072378.1| 712362 g4600 i0 97.802 63.8216216216216 182 4 98 0 4 185 25811 25630 Leptotrichia sp. oral taxon 221 strain F0705 chromosome, complete genome blastn 11807 315 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia sp. oral taxon 221
4241195 4241195 PRJNA400391_S_NODE_5184_length_173_cov_437.528986_g5123_i0 PRJNA400391 5184 173 437.528986 756.92514578 Leptotrichia hongkongensis 554406 Bacteria Bacteria 309 7.81e-80   NTclustered gi|1708587163|dbj|AP019846.1| 554406 g5123 i0 98.844 449.387283236994 173 2 100 0 1 173 1622612 1622440 Leptotrichia hongkongensis JMUB5056 DNA, complete genome blastn 77744 309 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia hongkongensis
6184117 6184117 PRJNA400391_S_NODE_25_length_920_cov_83.616949_g16_i0 PRJNA400391 25 920 83.616949 769.2759308 Cetobacterium 180162 Bacteria Bacteria 1345 0   NTclustered gi|2865368125|gb|CP122294.1| 188913 g16 i0 99.593 431.495652173913 737 3 80 0 119 855 279617 278881 Cetobacterium somerae strain MSU41 plasmid p41_t2, complete sequence blastn 396976 1345 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
8067392 8067392 PRJNA400391_S_NODE_3367_length_219_cov_3.413043_g3306_i0 PRJNA400391 3367 219 3.413043 7.47456417 Leptotrichia sp. oral taxon 221 712362 Bacteria Bacteria 313 8.05e-81   NTclustered gi|2028889048|gb|CP072378.1| 712362 g3306 i0 98.857 89.296803652968 175 2 81 0 8 182 23496 23670 Leptotrichia sp. oral taxon 221 strain F0705 chromosome, complete genome blastn 19556 313 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia sp. oral taxon 221
8733850 8733850 PRJNA400391_S_NODE_3187_length_225_cov_5.805263_g3126_i0 PRJNA400391 3187 225 5.805263 13.06184175 Fusobacterium 848 Bacteria Bacteria 361 2.9299999999999993e-95   NTclustered gi|2705042081|gb|CP085192.1| 856 g3126 i0 95.556 523.444444444444 225 10 100 0 1 225 3422442 3422666 Fusobacterium varium strain SB069 chromosome blastn 117775 361 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium varium
9342249 9342249 PRJNA400391_S_NODE_3948_length_203_cov_1.255952_g3887_i0 PRJNA400391 3948 203 1.255952 2.54958256 Leptotrichia sp. oral taxon 221 712362 Bacteria Bacteria 342 9.369999999999999e-90   NTclustered gi|2028889048|gb|CP072378.1| 712362 g3887 i0 98.953 54.3103448275862 191 2 94 0 1 191 25665 25475 Leptotrichia sp. oral taxon 221 strain F0705 chromosome, complete genome blastn 11025 342 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia sp. oral taxon 221
15716759 15716759 PRJNA400391_S_NODE_3033_length_231_cov_2.556122_g2972_i0 PRJNA400391 3033 231 2.556122 5.90464182 Leptotrichia sp. oral taxon 221 712362 Bacteria Bacteria 427 2.9399999999999998e-115   NTclustered gi|2028889048|gb|CP072378.1| 712362 g2972 i0 100 484.463203463203 231 0 100 0 1 231 26495 26725 Leptotrichia sp. oral taxon 221 strain F0705 chromosome, complete genome blastn 111911 427 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia sp. oral taxon 221
17658588 17658588 PRJNA400391_S_NODE_34_length_888_cov_86.058617_g16_i1 PRJNA400391 34 888 86.058617 764.20051896 Cetobacterium 180162 Bacteria Bacteria 1476 0   NTclustered gi|2865368125|gb|CP122294.1| 188913 g16 i1 99.028 485.826576576577 823 8 93 0 1 823 279703 278881 Cetobacterium somerae strain MSU41 plasmid p41_t2, complete sequence blastn 431414 1476 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
20207209 20207209 PRJNA400391_S_NODE_2216_length_268_cov_3.948498_g2155_i0 PRJNA400391 2216 268 3.948498 10.58197464 Sebaldella 32068 Bacteria Bacteria 235 2.27e-57   NTclustered gi|470485033|ref|NR_076681.1| 826 g2155 i0 82.721 485.410447761194 272 39 100 8 1 268 1654 1921 Sebaldella termitidis strain ATCC 33386 23S ribosomal RNA gene, complete sequence blastn 130090 235 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Sebaldella Sebaldella termitidis
20815711 20815711 PRJNA400391_S_NODE_3077_length_229_cov_9.010309_g3016_i0 PRJNA400391 3077 229 9.010309 20.63360761 Cetobacterium somerae 188913 Bacteria Bacteria 418 1.7499999999999995e-112   NTclustered gi|2850954511|gb|CP173065.1| 1319815 g3016 i0 99.563 500.633187772926 229 1 100 0 1 229 941118 941346 Cetobacterium somerae ATCC BAA-474 chromosome blastn 114645 418 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
21482766 21482766 PRJNA400391_S_NODE_5657_length_165_cov_493.607692_g5596_i0 PRJNA400391 5657 165 493.607692 814.4526918 Cetobacterium 180162 Bacteria Bacteria 305 9.59e-79   NTclustered gi|2865368125|gb|CP122294.1| 188913 g5596 i0 100 510 165 0 100 0 1 165 279821 279985 Cetobacterium somerae strain MSU41 plasmid p41_t2, complete sequence blastn 84150 305 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;