RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA400391", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 8 ✖

tax_kingdom 1

  • Bacillati · 8 ✖

bioproject 1

  • PRJNA400391 · 8 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
414033 414033 PRJNA400391_S_NODE_3981_length_202_cov_3.017964_g3920_i0 PRJNA400391 3981 202 3.017964 6.09628728 Anaerolineales bacterium 2073117 Bacteria Bacteria 311 2.63e-80   NTclustered gi|2556906889|gb|CP129483.1| 2073117 g3920 i0 94.527 180.460396039604 201 11 99 0 1 201 2028363 2028163 MAG: Anaerolineales bacterium isolate cMAG.13 chromosome, complete genome blastn 36453 311 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
1688949 1688949 PRJNA400391_S_NODE_5702_length_165_cov_1.430769_g5641_i0 PRJNA400391 5702 165 1.430769 2.36076885 Anaerolineales bacterium 2073117 Bacteria Bacteria 239 9.87e-59   NTclustered gi|2556899361|gb|CP129481.1| 2073117 g5641 i0 92.727 17.6363636363636 165 12 100 0 1 165 1234073 1233909 MAG: Anaerolineales bacterium isolate cMAG.15 chromosome, complete genome blastn 2910 239 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
6791823 6791823 PRJNA400391_S_NODE_4506_length_188_cov_21.862745_g4445_i0 PRJNA400391 4506 188 21.862745 41.1019606 Anaerolineales bacterium 2073117 Bacteria Bacteria 342 8.539999999999999e-90   NTclustered gi|2556895010|gb|CP129480.1| 2073117 g4445 i0 99.468 117.5 188 1 100 0 1 188 1577359 1577172 MAG: Anaerolineales bacterium isolate cMAG.16 chromosome, complete genome blastn 22090 342 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
8067365 8067365 PRJNA400391_S_NODE_2087_length_275_cov_10.991667_g2026_i0 PRJNA400391 2087 275 10.991667 30.22708425 uncultured Anaerolineaceae bacterium 310067 Bacteria Bacteria 370 6.14e-98   NTclustered gi|310323905|gb|HQ044406.1| 310067 g2026 i0 90.942 100.04 276 23 100 2 1 275 392 118 Uncultured Anaerolinaceae bacterium clone GE7GXPU01B8DOW 16S ribosomal RNA gene, partial sequence blastn 27511 370 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   uncultured Anaerolineaceae bacterium
8067450 8067450 PRJNA400391_S_NODE_6447_length_153_cov_3.245763_g6386_i0 PRJNA400391 6447 153 3.245763 4.96601739 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 195 1.97e-45   NTclustered gi|2874253788|emb|OY969772.1| 1672391 g6386 i0 89.542 151.549019607843 153 16 100 0 1 153 671647 671495 MAG: uncultured Chloroflexia bacterium isolate MFD02416.bin.2.42 genome assembly, chromosome: 1 blastn 23187 195 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
18265775 18265775 PRJNA400391_S_NODE_955_length_362_cov_4.623853_g894_i0 PRJNA400391 955 362 4.623853 16.73834786 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 464 3.719999999999999e-126   NTclustered gi|2874253882|emb|OY969938.1| 1672391 g894 i0 90.278 608.450276243094 360 27 98 7 1 356 2064106 2063751 MAG: uncultured Chloroflexia bacterium isolate MFD02416.bin.c.1 genome assembly, chromosome: 1 blastn 220259 464 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
19539875 19539875 PRJNA400391_S_NODE_4916_length_179_cov_5.298611_g4855_i0 PRJNA400391 4916 179 5.298611 9.48451369 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 291 2.95e-74   NTclustered gi|2874253788|emb|OY969772.1| 1672391 g4855 i0 96.067 112.664804469274 178 7 99 0 1 178 670246 670069 MAG: uncultured Chloroflexia bacterium isolate MFD02416.bin.2.42 genome assembly, chromosome: 1 blastn 20167 291 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
24640497 24640497 PRJNA400391_S_NODE_540_length_441_cov_35.736453_g480_i0 PRJNA400391 540 441 35.736453 157.59775773 Anaerolineales bacterium 2073117 Bacteria Bacteria 501 3.52e-137   NTclustered gi|2556899361|gb|CP129481.1| 2073117 g480 i0 87.5 282.977324263039 448 38 98 8 1 434 1234388 1233945 MAG: Anaerolineales bacterium isolate cMAG.15 chromosome, complete genome blastn 124793 501 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;