contig_metadata
46 rows where bioproject = "PRJNA400391" and tax_clade = "core chlorophytes"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 413996 | 413996 | PRJNA400391_S_NODE_2361_length_259_cov_260.647321_g2300_i0 | PRJNA400391 | 2361 | 259 | 260.647321 | 675.07656139 | Microglena monadina | 47904 | Plants | Plants | 298 | 2.74e-76 | NTclustered | gi|952953029|gb|KT624798.1| | 47904 | g2300 | i0 | 97.159 | 152.057915057915 | 176 | 5 | 68 | 0 | 4 | 179 | 7367 | 7192 | Microglena monadina clone contig-67 chloroplast, partial genome | blastn | 39383 | 298 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Microglena | Microglena monadina | |
| 414043 | 414043 | PRJNA400391_S_NODE_4381_length_191_cov_12.179487_g4320_i0 | PRJNA400391 | 4381 | 191 | 12.179487 | 23.26282017 | Chlorosarcina stigmatica | 327050 | Plants | Plants | 342 | 8.699999999999999e-90 | NTclustered | gi|66864283|gb|DQ015738.1| | 327050 | g4320 | i0 | 98.953 | 99.9842931937173 | 191 | 2 | 100 | 0 | 1 | 191 | 1595 | 1785 | Chlorosarcina stigmatica strain UTEX 962 26S ribosomal RNA gene, partial sequence | blastn | 19097 | 342 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlorosarcinales | Chlorosarcinaceae | Chlorosarcina | Chlorosarcina stigmatica | |
| 1081111 | 1081111 | PRJNA400391_S_NODE_5381_length_170_cov_4.222222_g5320_i0 | PRJNA400391 | 5381 | 170 | 4.222222 | 7.1777774 | Chlamydomonadaceae | 3051 | Plants | Plants | 303 | 3.55e-78 | NTclustered | gi|6120000|gb|AF183460.1| | 28456 | g5320 | i0 | 98.824 | 100.017647058824 | 170 | 2 | 100 | 0 | 1 | 170 | 892 | 1061 | Chlamydomonas noctigama culture SAG:33.72 strain SAG 33.72 28S ribosomal RNA gene, partial sequence | blastn | 17003 | 303 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas noctigama | |
| 1688847 | 1688847 | PRJNA400391_S_NODE_1402_length_318_cov_3.858657_g1341_i0 | PRJNA400391 | 1402 | 318 | 3.858657 | 12.27052926 | Characiochloris acuminata | 167768 | Plants | Plants | 464 | 3.23e-126 | NTclustered | gi|959124528|ref|NC_028584.1| | 167768 | g1341 | i0 | 92.879 | 124.808176100629 | 323 | 18 | 100 | 4 | 1 | 318 | 95501 | 95179 | Characiochloris acuminata culture-collection SAG:31.95 chloroplast, complete genome | blastn | 39689 | 464 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Characiochloridaceae | Characiochloris | Characiochloris acuminata | |
| 2356437 | 2356437 | PRJNA400391_S_NODE_1822_length_290_cov_42.125490_g1761_i0 | PRJNA400391 | 1822 | 290 | 42.12549 | 122.163921 | Polytoma | 40525 | Plants | Plants | 531 | 2.83e-146 | NTclustered | gi|852488|gb|U22931.1|PAU22931 | 40526 | g1761 | i0 | 99.655 | 100.268965517241 | 290 | 1 | 100 | 0 | 1 | 290 | 607 | 896 | Polytoma anomale strain SAG 62-21 18S ribosomal RNA (Rrn18) gene, complete sequence | blastn | 29078 | 531 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Polytoma | Polytoma anomale | |
| 2964784 | 2964784 | PRJNA400391_S_NODE_203_length_601_cov_13.872792_g155_i0 | PRJNA400391 | 203 | 601 | 13.872792 | 83.37547992 | Heterotetracystis akinetos | 361668 | Plants | Plants | 121 | 1.61e-22 | NTclustered | gi|108860511|dbj|AB244243.1| | 361668 | g155 | i0 | 82.069 | 22.3610648918469 | 145 | 23 | 24 | 3 | 455 | 599 | 1478 | 1337 | Heterotetracystis akinetos UTEX1675 gene for 28S rRNA, partial sequence | blastn | 13439 | 121 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlorococcaceae | Heterotetracystis | Heterotetracystis akinetos | |
| 2964809 | 2964809 | PRJNA400391_S_NODE_3163_length_226_cov_3.513089_g3102_i0 | PRJNA400391 | 3163 | 226 | 3.513089 | 7.93958114 | Tupiella akineta | 160070 | Plants | Plants | 372 | 1.36e-98 | NTclustered | gi|108796875|ref|NC_008114.1| | 160070 | g3102 | i0 | 96.444 | 106.561946902655 | 225 | 8 | 99 | 0 | 1 | 225 | 141478 | 141254 | Pseudendoclonium akinetum chloroplast, complete genome | blastn | 24083 | 372 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Ulotrichales | Tupiellaceae | Tupiella | Tupiella akineta | |
| 2964835 | 2964835 | PRJNA400391_S_NODE_4363_length_192_cov_1.968153_g4302_i0 | PRJNA400391 | 4363 | 192 | 1.968153 | 3.77885376 | Microspora sp. UTEX LB472 | 163318 | Plants | Plants | 309 | 8.890000000000001e-80 | NTclustered | gi|1509778575|gb|MG778408.1| | 163318 | g4302 | i0 | 95.833 | 131.666666666667 | 192 | 6 | 99 | 2 | 1 | 190 | 66886 | 66695 | Microspora sp. UTEX LB472 chloroplast, partial genome | blastn | 25280 | 309 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Microsporaceae | Microspora | Microspora sp. UTEX LB472 | ||
| 3631813 | 3631813 | PRJNA400391_S_NODE_1163_length_340_cov_191.895082_g1102_i0 | PRJNA400391 | 1163 | 340 | 191.895082 | 652.4432788 | Chlamydomonas | 3052 | Plants | Plants | 396 | 1.29e-105 | NTclustered | gi|397087|emb|X68892.1| | 28456 | g1102 | i0 | 93.284 | 131.9 | 268 | 18 | 79 | 0 | 73 | 340 | 855 | 588 | Chloroplast Chlamydomonas geitleri rrnL gene, exon 2 | blastn | 44846 | 396 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas noctigama | |
| 3631815 | 3631815 | PRJNA400391_S_NODE_123_length_667_cov_6.018987_g87_i0 | PRJNA400391 | 123 | 667 | 6.018987 | 40.14664329 | root | 1 | Root_unresolved | Root_unresolved | 654 | 0 | NTclustered | gi|397103|emb|X68913.1| | 3054 | g87 | i0 | 89.333 | 246.892053973014 | 525 | 50 | 78 | 5 | 1 | 523 | 972 | 452 | Chloroplast C.moewusii rrnL gene, exon 1 | blastn | 164677 | 656 | 0.996951219512195 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas moewusii | |
| 5517773 | 5517773 | PRJNA400391_S_NODE_1785_length_292_cov_8.750973_g1724_i0 | PRJNA400391 | 1785 | 292 | 8.750973 | 25.55284116 | Lobocharacium coloradoense | 167772 | Plants | Plants | 484 | 2.2499999999999993e-132 | NTclustered | gi|15281669|gb|AF395509.1| | 167772 | g1724 | i0 | 96.575 | 100 | 292 | 10 | 100 | 0 | 1 | 292 | 1417 | 1708 | Lobocharacium coloradoense strain Kugrens 26S ribosomal RNA gene, partial sequence | blastn | 29200 | 484 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Characiosiphonaceae | Lobocharacium | Lobocharacium coloradoense | |
| 5517790 | 5517790 | PRJNA400391_S_NODE_2325_length_262_cov_1.488987_g2264_i0 | PRJNA400391 | 2325 | 262 | 1.488987 | 3.90114594 | Blidingia sp. DT1 | 2022611 | Plants | Plants | 115 | 3.01e-21 | NTclustered | gi|1220117795|gb|KY401415.1| | 2022611 | g2264 | i0 | 90.909 | 26.7595419847328 | 88 | 5 | 33 | 3 | 7 | 93 | 3269 | 3184 | Blidingia sp. DT1 28S ribosomal RNA gene, partial sequence | blastn | 7011 | 115 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Ulvales | Ulvaceae | Blidingia | Blidingia sp. DT1 | |
| 5517892 | 5517892 | PRJNA400391_S_NODE_705_length_399_cov_3.214286_g645_i0 | PRJNA400391 | 705 | 399 | 3.214286 | 12.82500114 | Chloromonas hohamii | 519985 | Plants | Plants | 416 | 1.18e-111 | NTclustered | gi|641446158|dbj|AB906354.1| | 519985 | g645 | i0 | 85.644 | 86.8471177944862 | 404 | 49 | 99 | 6 | 2 | 399 | 711 | 311 | Chloromonas hohamii gene for 26S ribosomal RNA, partial sequence, strain: UTEX SNO67 | blastn | 34652 | 416 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chloromonas | Chloromonas hohamii | |
| 6184154 | 6184154 | PRJNA400391_S_NODE_5565_length_167_cov_7.189394_g5504_i0 | PRJNA400391 | 5565 | 167 | 7.189394 | 12.00628798 | Eukaryota | 2759 | Plants | Plants | 309 | 7.53e-80 | NTclustered | gi|1160446|emb|Z28970.1| | 34157 | g5504 | i0 | 100 | 100 | 167 | 0 | 100 | 0 | 1 | 167 | 2039 | 1873 | G.planctonica 5.8S, 18S and 26S rRNA genes | blastn | 16700 | 309 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Ulotrichales | Ulotrichaceae | Gloeotilopsis | Gloeotilopsis planctonica | |
| 6791783 | 6791783 | PRJNA400391_S_NODE_2746_length_242_cov_2.024155_g2685_i0 | PRJNA400391 | 2746 | 242 | 2.024155 | 4.8984551 | Prototheca fontanea | 2836215 | Plants | Plants | 159 | 1.2499999999999999e-34 | NTclustered | gi|2692959646|ref|NC_086907.1| | 2836215 | g2685 | i0 | 87.681 | 65.2520661157025 | 138 | 16 | 57 | 1 | 1 | 137 | 1826 | 1963 | Prototheca fontanea strain PK2 plastid, complete genome | blastn | 15791 | 159 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Prototheca | Prototheca fontanea | |
| 8067372 | 8067372 | PRJNA400391_S_NODE_2407_length_257_cov_26.833333_g2346_i0 | PRJNA400391 | 2407 | 257 | 26.833333 | 68.96166581 | Chloromonas radiata | 47907 | Plants | Plants | 418 | 1.9999999999999994e-112 | NTclustered | gi|952953466|gb|KT625011.1| | 47907 | g2346 | i0 | 96.094 | 104.4046692607 | 256 | 10 | 99 | 0 | 2 | 257 | 8289 | 8544 | Chloromonas radiata clone contig14 chloroplast, partial genome | blastn | 26832 | 418 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chloromonas | Chloromonas radiata | |
| 9342189 | 9342189 | PRJNA400391_S_NODE_1228_length_334_cov_3.210702_g1167_i0 | PRJNA400391 | 1228 | 334 | 3.210702 | 10.72374468 | Sarcinofilum mucosum | 141643 | Plants | Plants | 481 | 3.39e-131 | NTclustered | gi|1197510887|ref|NC_034709.1| | 141643 | g1167 | i0 | 92.814 | 145.473053892216 | 334 | 20 | 100 | 3 | 1 | 334 | 147150 | 147479 | Trichosarcina mucosa culture SAG:4.90 chloroplast, complete genome | blastn | 48588 | 481 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Ulotrichales | Sarcinofilaceae | Sarcinofilum | Sarcinofilum mucosum | |
| 9342311 | 9342311 | PRJNA400391_S_NODE_708_length_398_cov_12.203857_g648_i0 | PRJNA400391 | 708 | 398 | 12.203857 | 48.57135086 | Chloromonas hohamii | 519985 | Plants | Plants | 396 | 1.5299999999999996e-105 | NTclustered | gi|641446158|dbj|AB906354.1| | 519985 | g648 | i0 | 91.93 | 69.9170854271357 | 285 | 19 | 71 | 4 | 1 | 282 | 311 | 594 | Chloromonas hohamii gene for 26S ribosomal RNA, partial sequence, strain: UTEX SNO67 | blastn | 27827 | 396 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chloromonas | Chloromonas hohamii | |
| 10618005 | 10618005 | PRJNA400391_S_NODE_4549_length_187_cov_8.276316_g4488_i0 | PRJNA400391 | 4549 | 187 | 8.276316 | 15.47671092 | Chlamydomonas pulsatilla | 57475 | Plants | Plants | 302 | 1.44e-77 | NTclustered | gi|66864277|gb|DQ015732.1| | 57475 | g4488 | i0 | 95.722 | 101.812834224599 | 187 | 8 | 100 | 0 | 1 | 187 | 2027 | 1841 | Chlamydomonas pulsatilla strain UTEX 410 26S ribosomal RNA gene, partial sequence | blastn | 19039 | 302 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas pulsatilla | |
| 10618034 | 10618034 | PRJNA400391_S_NODE_5529_length_168_cov_1.932331_g5468_i0 | PRJNA400391 | 5529 | 168 | 1.932331 | 3.24631608 | Prototheca wickerhamii | 3111 | Plants | Plants | 134 | 4.9000000000000005e-27 | NTclustered | gi|159031746|dbj|AB251598.1| | 3111 | g5468 | i0 | 83.221 | 55.2440476190476 | 149 | 22 | 87 | 2 | 1 | 146 | 1126 | 978 | Prototheca wickerhamii gene for 18S rRNA, partial sequence, clone: B | blastn | 9281 | 134 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Prototheca | Prototheca wickerhamii | |
| 11284337 | 11284337 | PRJNA400391_S_NODE_3729_length_208_cov_43.658960_g3668_i0 | PRJNA400391 | 3729 | 208 | 43.65896 | 90.8106368 | Eukaryota | 2759 | Plants | Plants | 379 | 7.359999999999998e-101 | NTclustered | gi|1714003650|gb|MN243923.1| | 3079 | g3668 | i0 | 99.519 | 100.197115384615 | 208 | 1 | 100 | 0 | 1 | 208 | 516 | 723 | Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence | blastn | 20841 | 379 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Chlorella | Chlorella sp. | |
| 11284367 | 11284367 | PRJNA400391_S_NODE_6649_length_150_cov_5.521739_g6588_i0 | PRJNA400391 | 6649 | 150 | 5.521739 | 8.2826085 | Eukaryota | 2759 | Plants | Plants | 122 | 9.18e-24 | NTclustered | gi|2576955160|gb|OR551481.1| | 113531 | g6588 | i0 | 87.156 | 68.6266666666667 | 109 | 13 | 72 | 1 | 43 | 150 | 4882 | 4774 | Tetradesmus distendus culture FBCC:A1020 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence | blastn | 10294 | 122 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Tetradesmus | Tetradesmus distendus | |
| 11892845 | 11892845 | PRJNA400391_S_NODE_1910_length_285_cov_3.692000_g1849_i0 | PRJNA400391 | 1910 | 285 | 3.692 | 10.5222 | Chlamydomonas noctigama | 28456 | Plants | Plants | 425 | 1.35e-114 | NTclustered | gi|17028277|gb|L43353.1|CRECPRRNLD | 28456 | g1849 | i0 | 93.728 | 119.561403508772 | 287 | 12 | 100 | 4 | 1 | 285 | 1550 | 1832 | Chlamydomonas geitleri chloroplast large subunit ribosomal RNA (rrnL) gene | blastn | 34075 | 425 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas noctigama | |
| 11892929 | 11892929 | PRJNA400391_S_NODE_550_length_438_cov_19.359801_g490_i0 | PRJNA400391 | 550 | 438 | 19.359801 | 84.79592838 | Chloromonas hohamii | 519985 | Plants | Plants | 418 | 3.619999999999999e-112 | NTclustered | gi|641446158|dbj|AB906354.1| | 519985 | g490 | i0 | 84.876 | 58.0958904109589 | 443 | 35 | 100 | 14 | 1 | 438 | 311 | 726 | Chloromonas hohamii gene for 26S ribosomal RNA, partial sequence, strain: UTEX SNO67 | blastn | 25446 | 418 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chloromonas | Chloromonas hohamii | |
| 11892951 | 11892951 | PRJNA400391_S_NODE_710_length_398_cov_10.002755_g650_i0 | PRJNA400391 | 710 | 398 | 10.002755 | 39.8109649 | Hazenia capsulata | 2202518 | Plants | Plants | 671 | 0 | NTclustered | gi|1197511155|ref|NC_034714.1| | 2202518 | g650 | i0 | 97 | 116.625628140704 | 400 | 10 | 100 | 2 | 1 | 398 | 81163 | 80764 | Hazenia capsulata chloroplast, complete genome | blastn | 46417 | 671 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Ulotrichales | Hazeniaceae | Hazenia | Hazenia capsulata | |
| 11892956 | 11892956 | PRJNA400391_S_NODE_970_length_361_cov_8.092025_g909_i0 | PRJNA400391 | 970 | 361 | 8.092025 | 29.21221025 | Dysmorphococcus sp. UTEX 1765 | 1328809 | Plants | Plants | 243 | 1.89e-59 | NTclustered | gi|485073433|gb|KC196732.1| | 1328809 | g909 | i0 | 79.339 | 90.7534626038781 | 363 | 61 | 99 | 13 | 5 | 360 | 844 | 1199 | Dysmorphococcus sp. UTEX 1765 26S ribosomal RNA gene, partial sequence | blastn | 32762 | 243 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Phacotaceae | Dysmorphococcus | Dysmorphococcus sp. UTEX 1765 | |
| 13167866 | 13167866 | PRJNA400391_S_NODE_4391_length_191_cov_2.070513_g4330_i0 | PRJNA400391 | 4391 | 191 | 2.070513 | 3.95467983 | Chlamydomonas zimbabwiensis | 158510 | Plants | Plants | 278 | 2.49e-70 | NTclustered | gi|66864303|gb|DQ015758.1| | 158510 | g4330 | i0 | 93.158 | 18.6544502617801 | 190 | 12 | 99 | 1 | 1 | 189 | 3011 | 3200 | Chlamydomonas zimbabwiensis strain UTEX 2214 26S ribosomal RNA gene, partial sequence | blastn | 3563 | 278 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas zimbabwiensis | |
| 13167881 | 13167881 | PRJNA400391_S_NODE_5211_length_173_cov_3.079710_g5150_i0 | PRJNA400391 | 5211 | 173 | 3.07971 | 5.3278983 | uncultured Hazenia | 3049183 | Plants | Plants | 313 | 6.04e-81 | NTclustered | gi|2515376638|gb|OR101495.1| | 3049183 | g5150 | i0 | 99.419 | 88.6705202312139 | 172 | 1 | 99 | 0 | 1 | 172 | 933 | 1104 | Uncultured Hazenia clone mgcl7_AM06 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence | blastn | 15340 | 313 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Ulotrichales | Hazeniaceae | uncultured Hazenia | ||
| 13167916 | 13167916 | PRJNA400391_S_NODE_971_length_361_cov_7.401840_g910_i0 | PRJNA400391 | 971 | 361 | 7.40184 | 26.7206424 | Chlamydomonas pulsatilla | 57475 | Plants | Plants | 612 | 1.2499999999999997e-170 | NTclustered | gi|66864277|gb|DQ015732.1| | 57475 | g910 | i0 | 97.23 | 43.4072022160665 | 361 | 10 | 100 | 0 | 1 | 361 | 2871 | 3231 | Chlamydomonas pulsatilla strain UTEX 410 26S ribosomal RNA gene, partial sequence | blastn | 15670 | 612 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas pulsatilla | |
| 15108816 | 15108816 | PRJNA400391_S_NODE_4552_length_187_cov_5.230263_g4491_i0 | PRJNA400391 | 4552 | 187 | 5.230263 | 9.78059181 | Eukaryota | 2759 | Plants | Plants | 100 | 5.64e-17 | NTclustered | gi|371782100|emb|HE610132.1| | 3159 | g4491 | i0 | 86.957 | 45.8770053475936 | 92 | 9 | 49 | 3 | 97 | 187 | 3673 | 3762 | Pedinomonas minor 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain SAG 1965-3 | blastn | 8579 | 100 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Pedinophyceae | Pedinomonadales | Pedinomonadaceae | Pedinomonas | Pedinomonas minor | |
| 15716829 | 15716829 | PRJNA400391_S_NODE_5673_length_165_cov_6.361538_g5612_i0 | PRJNA400391 | 5673 | 165 | 6.361538 | 10.4965377 | Tupiella akineta | 160070 | Plants | Plants | 289 | 9.66e-74 | NTclustered | gi|108796875|ref|NC_008114.1| | 160070 | g5612 | i0 | 98.182 | 120.072727272727 | 165 | 3 | 100 | 0 | 1 | 165 | 144206 | 144042 | Pseudendoclonium akinetum chloroplast, complete genome | blastn | 19812 | 289 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Ulotrichales | Tupiellaceae | Tupiella | Tupiella akineta | |
| 16991647 | 16991647 | PRJNA400391_S_NODE_5974_length_160_cov_4.784000_g5913_i0 | PRJNA400391 | 5974 | 160 | 4.784 | 7.6544 | Oogamochlamys gigantea | 158507 | Plants | Plants | 211 | 2.07e-50 | NTclustered | gi|66864302|gb|DQ015757.1| | 158507 | g5913 | i0 | 91.026 | 65.5375 | 156 | 14 | 98 | 0 | 1 | 156 | 2319 | 2474 | Oogamochlamys gigantea strain SAG 44.91 26S ribosomal RNA gene, partial sequence | blastn | 10486 | 211 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Oogamochlamys | Oogamochlamys gigantea | |
| 17658577 | 17658577 | PRJNA400391_S_NODE_2714_length_243_cov_9.269231_g2653_i0 | PRJNA400391 | 2714 | 243 | 9.269231 | 22.52423133 | Ulvophyceae | 33103 | Plants | Plants | 346 | 8.97e-91 | NTclustered | gi|371782086|emb|HE610118.1| | 138176 | g2653 | i0 | 93.534 | 94.9711934156379 | 232 | 15 | 95 | 0 | 12 | 243 | 2311 | 2542 | Desmochloris halophila 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain UTEX 2073 | blastn | 23078 | 346 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Chlorocystidales | Chlorocystidaceae | Desmochloris | Desmochloris halophila | |
| 17658598 | 17658598 | PRJNA400391_S_NODE_4234_length_195_cov_18.456250_g4173_i0 | PRJNA400391 | 4234 | 195 | 18.45625 | 35.9896875 | Chlamydomonas | 3052 | Plants | Plants | 322 | 1.16e-83 | NTclustered | gi|167047969|gb|EU410621.1| | 3055 | g4173 | i0 | 96.429 | 101.851282051282 | 196 | 6 | 100 | 1 | 1 | 195 | 2579 | 2384 | Chlamydomonas reinhardtii 26S ribosomal RNA gene, partial sequence | blastn | 19861 | 322 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 18265685 | 18265685 | PRJNA400391_S_NODE_3275_length_222_cov_6.149733_g3214_i0 | PRJNA400391 | 3275 | 222 | 6.149733 | 13.65240726 | Chlamydomonas sp. CCMP235 | 327070 | Plants | Plants | 291 | 3.83e-74 | NTclustered | gi|2243438197|emb|LR798803.1| | 327070 | g3214 | i0 | 90.455 | 5.97747747747748 | 220 | 21 | 99 | 0 | 3 | 222 | 7018 | 6799 | Chlamydomonas sp. CCMP235 partial 45s rRNA cluster gene for 45s rRNA cluster | blastn | 1327 | 291 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas sp. CCMP235 | |
| 18932535 | 18932535 | PRJNA400391_S_NODE_3915_length_203_cov_24.571429_g3854_i0 | PRJNA400391 | 3915 | 203 | 24.571429 | 49.88000087 | Eukaryota | 2759 | Plants | Plants | 368 | 1.55e-97 | NTclustered | gi|207581628|gb|FJ178413.1| | 3046 | g3854 | i0 | 99.505 | 99.5073891625616 | 202 | 1 | 99 | 0 | 1 | 202 | 309 | 510 | Dunaliella bardawil strain Y5 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence | blastn | 20200 | 368 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Dunaliellaceae | Dunaliella | Dunaliella salina | |
| 19539793 | 19539793 | PRJNA400391_S_NODE_1316_length_326_cov_8.436426_g1255_i0 | PRJNA400391 | 1316 | 326 | 8.436426 | 27.50274876 | Desmochloris halophila | 138176 | Plants | Plants | 464 | 3.3199999999999997e-126 | NTclustered | gi|371782086|emb|HE610118.1| | 138176 | g1255 | i0 | 92.593 | 66.7546012269939 | 324 | 23 | 99 | 1 | 3 | 326 | 3989 | 3667 | Desmochloris halophila 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain UTEX 2073 | blastn | 21762 | 464 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Chlorocystidales | Chlorocystidaceae | Desmochloris | Desmochloris halophila | |
| 19539830 | 19539830 | PRJNA400391_S_NODE_2756_length_241_cov_12.990291_g2695_i0 | PRJNA400391 | 2756 | 241 | 12.990291 | 31.30660131 | Blidingia sp. DT1 | 2022611 | Plants | Plants | 333 | 6.919999999999998e-87 | NTclustered | gi|1220117795|gb|KY401415.1| | 2022611 | g2695 | i0 | 94.495 | 125.307053941909 | 218 | 8 | 90 | 1 | 4 | 221 | 2518 | 2305 | Blidingia sp. DT1 28S ribosomal RNA gene, partial sequence | blastn | 30199 | 333 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Ulvales | Ulvaceae | Blidingia | Blidingia sp. DT1 | |
| 19539909 | 19539909 | PRJNA400391_S_NODE_6576_length_151_cov_3.758621_g6515_i0 | PRJNA400391 | 6576 | 151 | 3.758621 | 5.67551771 | Chlamydomonas pulsatilla | 57475 | Plants | Plants | 263 | 5.23e-66 | NTclustered | gi|66864277|gb|DQ015732.1| | 57475 | g6515 | i0 | 98.013 | 100.013245033113 | 151 | 3 | 100 | 0 | 1 | 151 | 1222 | 1372 | Chlamydomonas pulsatilla strain UTEX 410 26S ribosomal RNA gene, partial sequence | blastn | 15102 | 263 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas pulsatilla | |
| 20207265 | 20207265 | PRJNA400391_S_NODE_6216_length_157_cov_1.573770_g6155_i0 | PRJNA400391 | 6216 | 157 | 1.57377 | 2.4708189 | Chlamydomonas | 3052 | Plants | Plants | 222 | 9.329999999999999e-54 | NTclustered | gi|17028264|gb|L49148.1|CRECPRGOLF | 28460 | g6155 | i0 | 92.357 | 117.452229299363 | 157 | 10 | 100 | 1 | 1 | 157 | 4014 | 4168 | Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene | blastn | 18440 | 224 | 0.991071428571429 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas mexicana | |
| 20815745 | 20815745 | PRJNA400391_S_NODE_4317_length_193_cov_5.259494_g4256_i0 | PRJNA400391 | 4317 | 193 | 5.259494 | 10.15082342 | Hazenia capsulata | 2202518 | Plants | Plants | 300 | 5.3800000000000004e-77 | NTclustered | gi|17028245|gb|L42837.1|CMKCPRGOL | 2202518 | g4256 | i0 | 95.238 | 108.658031088083 | 189 | 9 | 98 | 0 | 1 | 189 | 1244 | 1432 | Hazenia capsulata large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast | blastn | 20971 | 300 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Ulotrichales | Hazeniaceae | Hazenia | Hazenia capsulata | |
| 20815782 | 20815782 | PRJNA400391_S_NODE_6377_length_154_cov_3.495798_g6316_i0 | PRJNA400391 | 6377 | 154 | 3.495798 | 5.38352892 | Desmochloris halophila | 138176 | Plants | Plants | 263 | 5.36e-66 | NTclustered | gi|371782086|emb|HE610118.1| | 138176 | g6316 | i0 | 97.403 | 100 | 154 | 4 | 100 | 0 | 1 | 154 | 2127 | 1974 | Desmochloris halophila 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain UTEX 2073 | blastn | 15400 | 263 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Chlorocystidales | Chlorocystidaceae | Desmochloris | Desmochloris halophila | |
| 22090576 | 22090576 | PRJNA400391_S_NODE_558_length_437_cov_25.415423_g498_i0 | PRJNA400391 | 558 | 437 | 25.415423 | 111.06539851 | Chloromonas hohamii | 519985 | Plants | Plants | 399 | 1.31e-106 | NTclustered | gi|641446158|dbj|AB906354.1| | 519985 | g498 | i0 | 92.527 | 55.8329519450801 | 281 | 18 | 64 | 3 | 159 | 437 | 590 | 311 | Chloromonas hohamii gene for 26S ribosomal RNA, partial sequence, strain: UTEX SNO67 | blastn | 24399 | 399 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chloromonas | Chloromonas hohamii | |
| 24032762 | 24032762 | PRJNA400391_S_NODE_1759_length_294_cov_16.621622_g1698_i0 | PRJNA400391 | 1759 | 294 | 16.621622 | 48.86756868 | Chlamydomonadaceae | 3051 | Plants | Plants | 503 | 6.26e-138 | NTclustered | gi|2528847319|gb|OR211461.1| | 35704 | g1698 | i0 | 97.619 | 100.003401360544 | 294 | 5 | 100 | 1 | 1 | 294 | 39 | 330 | Chlamydomonas applanata isolate A9a small subunit ribosomal RNA gene, partial sequence | blastn | 29401 | 503 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas applanata | |
| 24640477 | 24640477 | PRJNA400391_S_NODE_4360_length_192_cov_2.923567_g4299_i0 | PRJNA400391 | 4360 | 192 | 2.923567 | 5.61324864 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 54.7 | 0.005 | NTclustered | gi|2082258742|ref|XM_043067566.1| | 3055 | g4299 | i0 | 100 | 0.604166666666667 | 29 | 0 | 15 | 0 | 84 | 112 | 9388 | 9360 | Chlamydomonas reinhardtii uncharacterized protein (CHLRE_11g468356v5), mRNA | blastn | 116 | 54.7 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 24640513 | 24640513 | PRJNA400391_S_NODE_6300_length_156_cov_1.041322_g6239_i0 | PRJNA400391 | 6300 | 156 | 1.041322 | 1.62446232 | uncultured Apatococcus | 1229086 | Plants | Plants | 289 | 9e-74 | NTclustered | gi|1031961068|gb|KX025109.1| | 1229086 | g6239 | i0 | 100 | 68.474358974359 | 156 | 0 | 100 | 0 | 1 | 156 | 1436 | 1281 | Uncultured Apatococcus clone GOGs_K08 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence | blastn | 10682 | 289 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | uncultured Apatococcus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;