RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA400391", tax_clade = "Opisthokonta" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA400391 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2964870 2964870 PRJNA400391_S_NODE_6663_length_150_cov_2.034783_g6602_i0 PRJNA400391 6663 150 2.034783 3.0521745 Glugoides intestinalis 174680 Fungi Fungi 191 2.48e-44   NTclustered gi|113470857|gb|DQ680158.2| 174680 g6602 i0 91.367 7.413333333333331 139 12 93 0 12 150 916 1054 Glugoides intestinalis isolate Gi3 23S ribosomal RNA gene, partial sequence; 23S-16S ribosomal RNA spacer, complete sequence; and 16S ribosomal RNA gene, partial sequence blastn 1112 191 1 Eukaryota Opisthokonta Fungi Microsporidia     Glugeidae Glugoides Glugoides intestinalis
21482760 21482760 PRJNA400391_S_NODE_4997_length_177_cov_2.394366_g4936_i0 PRJNA400391 4997 177 2.394366 4.23802782 Microsporidium 144516 Fungi Fungi 171 3.96e-38   NTclustered gi|2849943260|gb|PQ577808.1| 1844323 g4936 i0 85.207 89.6779661016949 169 22 94 3 1 167 464 631 Microsporidium sp. isolate IQN.1 small subunit ribosomal RNA gene, partial sequence blastn 15873 171 1 Eukaryota Opisthokonta Fungi Microsporidia       Microsporidium Microsporidium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;