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contig_metadata

4 rows where bioproject = "PRJNA400391", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA400391 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10618011 10618011 PRJNA400391_S_NODE_4749_length_183_cov_1.986486_g4688_i0 PRJNA400391 4749 183 1.986486 3.63526938 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 255 1.11e-63   NTclustered gi|1958073143|gb|CP064993.1| 2026720 g4688 i0 92.697 123.16393442623 178 12 97 1 1 178 595610 595434 Candidatus Saccharibacteria bacterium isolate Hirt_18-Q3-R61-65_MAXAC.330_cln chromosome, complete genome blastn 22539 255 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
10618014 10618014 PRJNA400391_S_NODE_4849_length_181_cov_1.897260_g4788_i0 PRJNA400391 4849 181 1.89726 3.4340406 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 230 6.62e-56   NTclustered gi|1474570736|gb|CP023991.1| 2026720 g4788 i0 92.5 74.6077348066298 160 12 88 0 22 181 883927 884086 Candidatus Saccharibacteria bacterium isolate CG19_WC_8_21_14_NA_150_51_44 chromosome, complete genome blastn 13504 230 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
14443045 14443045 PRJNA400391_S_NODE_5232_length_173_cov_1.224638_g5171_i0 PRJNA400391 5232 173 1.224638 2.11862374 Candidatus Saccharimonadia bacterium 2890869 Bacteria Bacteria 150 5.009999999999999e-32   NTclustered gi|2874254002|emb|OY970327.1| 2890869 g5171 i0 87.218 123.947976878613 133 16 77 1 28 160 680293 680162 MAG: Candidatus Saccharimonadia bacterium isolate MFD01275.bin.c.7 genome assembly, chromosome: 1 blastn 21443 150 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia       Candidatus Saccharimonadia bacterium
20207261 20207261 PRJNA400391_S_NODE_6056_length_159_cov_2.282258_g5995_i0 PRJNA400391 6056 159 2.282258 3.62879022 Bacteria 2 Bacteria Bacteria 270 3.3399999999999992e-68   NTclustered gi|2874253997|emb|OY970322.1| 179883 g5995 i0 97.468 20.9811320754717 158 4 99 0 2 159 419203 419046 MAG: uncultured Candidatus Saccharibacteria bacterium isolate MFD05512.bin.c.2 genome assembly, chromosome: 1 blastn 3336 272 0.992647058823529 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         uncultured Candidatus Saccharibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;