RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA400391", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Kaiseribacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kaiseribacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA400391 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5517886 5517886 PRJNA400391_S_NODE_6305_length_156_cov_0.933884_g6244_i0 PRJNA400391 6305 156 0.933884 1.45685904 Candidatus Kaiserbacteria bacterium 2030810 Bacteria Bacteria 152 1.23e-32   NTclustered gi|1958016626|gb|CP064968.1| 2030810 g6244 i0 87.97 24.3589743589744 133 11 84 5 1 131 977465 977594 MAG: Candidatus Kaiserbacteria bacterium isolate Damh_18-Q3-R51-60_MAXAC.235_fly chromosome, complete genome blastn 3800 152 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;