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contig_metadata

21 rows where bioproject = "PRJNA400391", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 21 ✖

tax_clade 1

  • Amoebozoa · 21 ✖

bioproject 1

  • PRJNA400391 · 21 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
414057 414057 PRJNA400391_S_NODE_4881_length_180_cov_4.344828_g4820_i0 PRJNA400391 4881 180 4.344828 7.8206904 uncultured Vannellidae 544561 Discosea other_Eukaryota 128 2.47e-25   NTclustered gi|724028220|gb|KP099879.1| 544561 g4820 i0 96.154 38.7722222222222 78 3 43 0 103 180 922 845 Uncultured Vannellidae clone b29 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 6979 128 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae   uncultured Vannellidae
2964814 2964814 PRJNA400391_S_NODE_3303_length_221_cov_4.500000_g3242_i0 PRJNA400391 3303 221 4.5 9.945 Vexillifera multispinosa 1105342 Discosea other_Eukaryota 176 1.1099999999999999e-39   NTclustered gi|354720322|gb|HQ687481.1| 1105342 g3242 i0 82.353 45.2352941176471 221 22 98 13 5 221 1208 1001 Vexillifera multispinosa strain P124 small subunit ribosomal RNA gene, partial sequence blastn 9997 176 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera multispinosa
4241194 4241194 PRJNA400391_S_NODE_5084_length_175_cov_2.450000_g5023_i0 PRJNA400391 5084 175 2.45 4.2875 Vannella septentrionalis 197531 Discosea other_Eukaryota 228 2.2799999999999996e-55   NTclustered gi|300078499|gb|GU001161.1| 197531 g5023 i0 90.857 34.8742857142857 175 9 99 5 3 175 3623 3454 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 6103 228 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
5517776 5517776 PRJNA400391_S_NODE_1945_length_283_cov_4.733871_g1884_i0 PRJNA400391 1945 283 4.733871 13.39685493 Paramoeba aestuarina 180227 Discosea other_Eukaryota 446 1.03e-120   NTclustered gi|21913680|gb|AY121848.1| 180227 g1884 i0 95.088 101.551236749117 285 11 99 2 1 282 1071 787 Neoparamoeba aestuarina strain ATCC 50744 small subunit ribosomal RNA gene, complete sequence blastn 28739 446 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba aestuarina
5517794 5517794 PRJNA400391_S_NODE_2445_length_256_cov_5.357466_g2384_i0 PRJNA400391 2445 256 5.357466 13.71511296 Vannella septentrionalis 197531 Discosea other_Eukaryota 254 5.94e-63   NTclustered gi|300078499|gb|GU001161.1| 197531 g2384 i0 84.586 56.70703125 266 29 100 8 1 256 1172 909 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14517 254 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
8067409 8067409 PRJNA400391_S_NODE_4427_length_190_cov_3.006452_g4366_i0 PRJNA400391 4427 190 3.006452 5.7122588 Vannella septentrionalis 197531 Discosea other_Eukaryota 87.9 4.47e-13   NTclustered gi|300078499|gb|GU001161.1| 197531 g4366 i0 98 11.9526315789474 50 1 26 0 138 187 3087 3136 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 2271 87.9 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
8067440 8067440 PRJNA400391_S_NODE_5807_length_163_cov_1.515625_g5746_i0 PRJNA400391 5807 163 1.515625 2.47046875 Paradermamoeba levis 1072175 Discosea other_Eukaryota 222 9.79e-54   NTclustered gi|342309910|gb|JN247435.1| 1072175 g5746 i0 91.411 99.9386503067485 163 13 100 1 1 163 1972 1811 Paradermamoeba levis 18S ribosomal RNA gene, partial sequence; mitochondrial blastn 16290 222 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Paradermamoeba Paradermamoeba levis
10009119 10009119 PRJNA400391_S_NODE_3548_length_214_cov_2.089385_g3487_i0 PRJNA400391 3548 214 2.089385 4.4712839 Vannellidae 95227 Discosea other_Eukaryota 307 3.6400000000000006e-79   NTclustered gi|21913685|gb|AY121853.1| 200892 g3487 i0 92.523 100.579439252336 214 16 100 0 1 214 1587 1800 Vannella aberdonica strain ATCC 50815 small subunit ribosomal RNA gene, complete sequence blastn 21524 307 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella aberdonica
10617921 10617921 PRJNA400391_S_NODE_1289_length_329_cov_3.159864_g1228_i0 PRJNA400391 1289 329 3.159864 10.39595256 Planopodium desertum 2773111 Discosea other_Eukaryota 603 6.819999999999999e-168   NTclustered gi|330902850|gb|JF298244.1| 2773111 g1228 i0 99.696 60.4559270516717 329 1 100 0 1 329 175 503 Ovalopodium desertum clone 3702 18S ribosomal RNA gene, partial sequence blastn 19890 603 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Planopodium Planopodium desertum
10617947 10617947 PRJNA400391_S_NODE_2349_length_260_cov_19.986667_g2288_i0 PRJNA400391 2349 260 19.986667 51.9653342 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 285 2.15e-72   NTclustered gi|145386780|gb|EF216898.1| 180228 g2288 i0 86.415 33.2961538461538 265 31 100 4 1 260 763 1027 Paramoeba pemaquidensis strain WTUTS 28S large subunit ribosomal RNA gene, partial sequence blastn 8657 285 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
11892907 11892907 PRJNA400391_S_NODE_4590_length_186_cov_6.218543_g4529_i0 PRJNA400391 4590 186 6.218543 11.56648998 Vannella septentrionalis 197531 Discosea other_Eukaryota 222 1.15e-53   NTclustered gi|300078499|gb|GU001161.1| 197531 g4529 i0 88.77 40.0806451612903 187 14 100 4 1 186 1645 1825 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 7455 222 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
14442961 14442961 PRJNA400391_S_NODE_1892_length_286_cov_8.318725_g1831_i0 PRJNA400391 1892 286 8.318725 23.7915535 Vannella septentrionalis 197531 Discosea other_Eukaryota 388 1.77e-103   NTclustered gi|300078499|gb|GU001161.1| 197531 g1831 i0 91.379 63.7937062937063 290 15 99 6 5 286 2744 2457 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 18245 388 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
14443037 14443037 PRJNA400391_S_NODE_4832_length_181_cov_6.458904_g4771_i0 PRJNA400391 4832 181 6.458904 11.69061624 Vannella septentrionalis 197531 Discosea other_Eukaryota 196 6.709999999999999e-46   NTclustered gi|300078499|gb|GU001161.1| 197531 g4771 i0 97.391 62.9889502762431 115 3 64 0 1 115 1936 2050 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 11401 196 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
14443043 14443043 PRJNA400391_S_NODE_5172_length_174_cov_1.122302_g5111_i0 PRJNA400391 5172 174 1.122302 1.95280548 Cochliopodium minus 313997 Discosea other_Eukaryota 274 2.87e-69   NTclustered gi|330902862|gb|JF298257.1| 313997 g5111 i0 95.429 10.6666666666667 175 2 100 5 1 174 43 212 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 1856 274 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
15716846 15716846 PRJNA400391_S_NODE_6393_length_154_cov_1.756303_g6332_i0 PRJNA400391 6393 154 1.756303 2.70470662 Planopodium desertum 2773111 Discosea other_Eukaryota 279 5.33e-71   NTclustered gi|330902849|gb|JF298243.1| 2773111 g6332 i0 99.351 49.0844155844156 154 1 100 0 1 154 791 638 Ovalopodium desertum clone 3701 18S ribosomal RNA gene, partial sequence blastn 7559 279 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Planopodium Planopodium desertum
16991576 16991576 PRJNA400391_S_NODE_2234_length_267_cov_6.866379_g2173_i0 PRJNA400391 2234 267 6.866379 18.33323193 Vannella sp. ELH6 1215641 Discosea other_Eukaryota 455 1.5900000000000002e-123   NTclustered gi|399764226|gb|JQ271737.1| 1215641 g2173 i0 97.388 96.2359550561798 268 5 100 2 1 267 1111 845 Vannella sp. ELH6 18S ribosomal RNA gene, partial sequence blastn 25695 455 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. ELH6
16991649 16991649 PRJNA400391_S_NODE_6254_length_156_cov_3.446281_g6193_i0 PRJNA400391 6254 156 3.446281 5.37619836 Cochliopodium minus 313997 Discosea other_Eukaryota 268 1.1699999999999997e-67   NTclustered gi|330902862|gb|JF298257.1| 313997 g6193 i0 99.329 16.7307692307692 149 0 96 1 1 149 253 400 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 2610 268 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
20815671 20815671 PRJNA400391_S_NODE_1417_length_317_cov_8.269504_g1356_i0 PRJNA400391 1417 317 8.269504 26.21432768 Vannella septentrionalis 197531 Discosea other_Eukaryota 268 2.7099999999999998e-67   NTclustered gi|300078499|gb|GU001161.1| 197531 g1356 i0 89.815 47.1072555205047 216 13 66 5 1 210 2872 2660 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14933 268 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
20815775 20815775 PRJNA400391_S_NODE_5877_length_162_cov_0.929134_g5816_i0 PRJNA400391 5877 162 0.929134 1.50519708 Thecamoeba foliovenanda 2653195 Discosea other_Eukaryota 226 7.509999999999998e-55   NTclustered gi|2027879228|gb|MW970089.1| 2653195 g5816 i0 92.025 66.3271604938272 163 10 100 3 1 162 1872 2032 Thecamoeba foliovenanda strain Tfol_RM small subunit ribosomal RNA gene, partial sequence blastn 10745 226 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba foliovenanda
22758019 22758019 PRJNA400391_S_NODE_6258_length_156_cov_3.000000_g6197_i0 PRJNA400391 6258 156 3 4.68 Planopodium 2823620 Discosea other_Eukaryota 289 9e-74   NTclustered gi|330902850|gb|JF298244.1| 2773111 g6197 i0 100 61.0576923076923 156 0 100 0 1 156 836 991 Ovalopodium desertum clone 3702 18S ribosomal RNA gene, partial sequence blastn 9525 289 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Planopodium Planopodium desertum
23366104 23366104 PRJNA400391_S_NODE_1479_length_313_cov_3.755396_g1418_i0 PRJNA400391 1479 313 3.755396 11.75438948 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 315 3.38e-81   NTclustered gi|145386788|gb|EF216913.1| 180228 g1418 i0 91.739 39.223642172524 230 14 73 4 2 229 548 322 Paramoeba pemaquidensis strain NP251002 28S large subunit ribosomal RNA gene, partial sequence blastn 12277 315 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;