contig_metadata
57 rows where bioproject = "PRJNA400171" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1688562 | 1688562 | PRJNA400171_S_NODE_3542_length_221_cov_9.463542_g3452_i0 | PRJNA400171 | 3542 | 221 | 9.463542 | 20.91442782 | Escherichia coli | 562 | Bacteria | Bacteria | 409 | 1.0100000000000001e-109 | NTclustered | gi|2890460285|gb|CP177217.1| | 562 | g3452 | i0 | 100 | 669.493212669683 | 221 | 0 | 100 | 0 | 1 | 221 | 2728025 | 2728245 | Escherichia coli strain ECBR0223 chromosome, complete genome | blastn | 147958 | 409 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 2356412 | 2356412 | PRJNA400171_S_NODE_2762_length_242_cov_11.938967_g2672_i0 | PRJNA400171 | 2762 | 242 | 11.938967 | 28.89230014 | Pseudomonadaceae | 135621 | Bacteria | Bacteria | 442 | 1.1099999999999995e-119 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g2672 | i0 | 100 | 523.136363636364 | 239 | 0 | 99 | 0 | 4 | 242 | 10414 | 10176 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 126599 | 444 | 0.995495495495496 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 2964637 | 2964637 | PRJNA400171_S_NODE_7083_length_170_cov_2.453901_g6993_i0 | PRJNA400171 | 7083 | 170 | 2.453901 | 4.1716317 | Methylobacterium radiotolerans | 31998 | Bacteria | Bacteria | 118 | 1.2099999999999999e-31 | NR | PJI52933.1 | 31998 | g6993 | i0 | 98.2 | 0.988235294117647 | 56 | 1 | 98.8 | 0 | 170 | 3 | 99 | 154 | PJI52933.1 FMN-dependent NADH-azoreductase [Methylobacterium radiotolerans] | diamond | 168 | 118 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium radiotolerans | ||
| 3631797 | 3631797 | PRJNA400171_S_NODE_8063_length_161_cov_1.992424_g7973_i0 | PRJNA400171 | 8063 | 161 | 1.992424 | 3.20780264 | root | 1 | Root_unresolved | Root_unresolved | 298 | 1.56e-76 | NTclustered | gi|1253244853|gb|CP021652.1| | 305 | g7973 | i0 | 100 | 458.086956521739 | 161 | 0 | 100 | 0 | 1 | 161 | 2011544 | 2011384 | Ralstonia solanacearum strain RS 488, complete sequence | blastn | 73752 | 298 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia solanacearum | ||
| 6184078 | 6184078 | PRJNA400171_S_NODE_7385_length_167_cov_2.550725_g7295_i0 | PRJNA400171 | 7385 | 167 | 2.550725 | 4.25971075 | Thauera | 33057 | Bacteria | Bacteria | 56.5 | 0.001 | NTclustered | gi|1373325852|gb|CP028339.1| | 44139 | g7295 | i0 | 100 | 0.718562874251497 | 30 | 0 | 18 | 0 | 135 | 164 | 1203032 | 1203003 | Thauera aromatica K172 chromosome, complete genome | blastn | 120 | 56.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Rhodocyclales | Zoogloeaceae | Thauera | Thauera aromatica | ||
| 6791394 | 6791394 | PRJNA400171_S_NODE_1966_length_272_cov_3.102881_g1876_i0 | PRJNA400171 | 1966 | 272 | 3.102881 | 8.43983632 | Marilutibacter maris | 1605891 | Bacteria | Bacteria | 52.8 | 0.025 | NTclustered | gi|1402969253|gb|CP029843.1| | 1605891 | g1876 | i0 | 100 | 0.102941176470588 | 28 | 0 | 10 | 0 | 157 | 184 | 596481 | 596454 | Marilutibacter maris strain HZ9B chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Marilutibacter | Marilutibacter maris | ||
| 7458920 | 7458920 | PRJNA400171_S_NODE_686_length_383_cov_15.135593_g596_i0 | PRJNA400171 | 686 | 383 | 15.135593 | 57.96932119 | Escherichia | 561 | Bacteria | Bacteria | 652 | 0 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g596 | i0 | 97.389 | 681.378590078329 | 383 | 10 | 100 | 0 | 1 | 383 | 277447 | 277065 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 260968 | 652 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 7458922 | 7458922 | PRJNA400171_S_NODE_7626_length_165_cov_1.933824_g7536_i0 | PRJNA400171 | 7626 | 165 | 1.933824 | 3.1908096 | Oxalobacteraceae | 75682 | Bacteria | Bacteria | 305 | 9.59e-79 | NTclustered | gi|2459474170|gb|CP119520.1| | 34071 | g7536 | i0 | 100 | 448.327272727273 | 165 | 0 | 100 | 0 | 1 | 165 | 1102288 | 1102452 | Telluria mixta strain ACM 1762 chromosome, complete genome | blastn | 73974 | 305 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Telluria | Telluria mixta | ||
| 7458923 | 7458923 | PRJNA400171_S_NODE_8246_length_159_cov_2.376923_g8156_i0 | PRJNA400171 | 8246 | 159 | 2.376923 | 3.77930757 | Oxalobacteraceae | 75682 | Bacteria | Bacteria | 294 | 1.98e-75 | NTclustered | gi|1861348618|gb|CP049828.1| | 29581 | g8156 | i0 | 100 | 523.037735849057 | 159 | 0 | 100 | 0 | 1 | 159 | 213712 | 213870 | Janthinobacterium lividum strain EIF2 chromosome, complete genome | blastn | 83163 | 294 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Janthinobacterium | Janthinobacterium lividum | ||
| 9341857 | 9341857 | PRJNA400171_S_NODE_2448_length_253_cov_2.607143_g2358_i0 | PRJNA400171 | 2448 | 253 | 2.607143 | 6.59607179 | Cupriavidus sp. EM10 | 2839983 | Bacteria | Bacteria | 84.2 | 8.14e-12 | NTclustered | gi|2049060412|gb|CP076060.1| | 2839983 | g2358 | i0 | 91.667 | 0.893280632411067 | 60 | 5 | 24 | 0 | 3 | 62 | 1156869 | 1156810 | Cupriavidus sp. EM10 chromosome 1, complete sequence | blastn | 226 | 84.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Cupriavidus sp. EM10 | ||
| 12559671 | 12559671 | PRJNA400171_S_NODE_3230_length_229_cov_2.720000_g3140_i0 | PRJNA400171 | 3230 | 229 | 2.72 | 6.2288 | Pseudomonadota | 1224 | Bacteria | Bacteria | 193 | 1.15e-44 | NTclustered | gi|2863087999|emb|OZ201293.1| | 3058603 | g3140 | i0 | 89.032 | 67.2183406113537 | 155 | 17 | 68 | 0 | 64 | 218 | 3080431 | 3080585 | Burkholderiaceae bacterium LMG 32992 genome assembly, chromosome: 1 | blastn | 15393 | 193 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Imbroritus | Imbroritus primus | ||
| 12559673 | 12559673 | PRJNA400171_S_NODE_390_length_464_cov_19.891954_g301_i0 | PRJNA400171 | 390 | 464 | 19.891954 | 92.29866656 | Pseudomonas | 286 | Bacteria | Bacteria | 782 | 0 | NTclustered | gi|2155051650|dbj|AP025275.1| | 2772558 | g301 | i0 | 97.386 | 377.887931034483 | 459 | 12 | 99 | 0 | 1 | 459 | 285742 | 286200 | Pseudomonas sp. MRCP1333 MRCP1333 DNA, complete genome | blastn | 175340 | 782 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas paralcaligenes | ||
| 15108751 | 15108751 | PRJNA400171_S_NODE_7132_length_169_cov_9.135714_g7042_i0 | PRJNA400171 | 7132 | 169 | 9.135714 | 15.43935666 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 313 | 5.859999999999999e-81 | NTclustered | gi|2023981091|gb|CP072662.1| | 562 | g7042 | i0 | 100 | 627.390532544379 | 169 | 0 | 100 | 0 | 1 | 169 | 2721211 | 2721043 | Escherichia coli strain BW25113 frmA KO chromosome | blastn | 106029 | 313 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 15716612 | 15716612 | PRJNA400171_S_NODE_7733_length_164_cov_1.629630_g7643_i0 | PRJNA400171 | 7733 | 164 | 1.62963 | 2.6725932 | Steroidobacter denitrificans | 465721 | Bacteria | Bacteria | 281 | 1.6000000000000001e-71 | NTclustered | gi|1002741593|gb|CP011971.1| | 465721 | g7643 | i0 | 97.561 | 181.634146341463 | 164 | 4 | 100 | 0 | 1 | 164 | 768166 | 768329 | Steroidobacter denitrificans strain DSM 18526, complete genome | blastn | 29788 | 281 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Steroidobacterales | Steroidobacteraceae | Steroidobacter | Steroidobacter denitrificans | ||
| 16991308 | 16991308 | PRJNA400171_S_NODE_414_length_455_cov_2.065728_g325_i0 | PRJNA400171 | 414 | 455 | 2.065728 | 9.3990624 | Azoarcus sp. DN11 | 356837 | Bacteria | Bacteria | 52.8 | 0.044 | NTclustered | gi|1488558463|gb|CP021731.1| | 356837 | g325 | i0 | 100 | 0.0615384615384615 | 28 | 0 | 6 | 0 | 101 | 128 | 1900147 | 1900120 | Azoarcus sp. DN11 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Rhodocyclales | Zoogloeaceae | Azoarcus | Azoarcus sp. DN11 | ||
| 19539716 | 19539716 | PRJNA400171_S_NODE_8916_length_154_cov_2.000000_g8826_i0 | PRJNA400171 | 8916 | 154 | 2 | 3.08 | Massilia cellulosiltytica | 2683234 | Bacteria | Bacteria | 261 | 1.93e-65 | NTclustered | gi|2897231334|gb|CP168562.1| | 2683234 | g8826 | i0 | 97.386 | 511.383116883117 | 153 | 4 | 99 | 0 | 1 | 153 | 5997439 | 5997287 | Massilia cellulosiltytica strain CT11-92 chromosome, complete genome | blastn | 78753 | 261 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Massilia | Massilia cellulosiltytica | ||
| 20207187 | 20207187 | PRJNA400171_S_NODE_156_length_668_cov_14.496088_g89_i0 | PRJNA400171 | 156 | 668 | 14.496088 | 96.83386784 | Pseudomonadaceae | 135621 | Bacteria | Bacteria | 1005 | 0 | NTclustered | gi|1876483579|gb|CP053697.2| | 2731681 | g89 | i0 | 93.899 | 571.988023952096 | 672 | 31 | 100 | 9 | 1 | 668 | 555917 | 556582 | Aquipseudomonas campi strain S1-A32-2 chromosome, complete genome | blastn | 382088 | 1011 | 0.99406528189911 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Aquipseudomonas | Aquipseudomonas campi | ||
| 20815518 | 20815518 | PRJNA400171_S_NODE_6997_length_171_cov_2.457746_g6907_i0 | PRJNA400171 | 6997 | 171 | 2.457746 | 4.20274566 | Roseateles amylovorans | 2978473 | Bacteria | Bacteria | 52.8 | 0.014 | NTclustered | gi|2327629256|gb|CP104562.2| | 2978473 | g6907 | i0 | 100 | 0.16374269005848 | 28 | 0 | 16 | 0 | 5 | 32 | 4961446 | 4961473 | Roseateles amylovorans strain BIM B-1768 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Roseateles amylovorans | ||
| 22090136 | 22090136 | PRJNA400171_S_NODE_2138_length_265_cov_2.118644_g2048_i0 | PRJNA400171 | 2138 | 265 | 2.118644 | 5.6144066 | Rubrivivax gelatinosus | 28068 | Bacteria | Bacteria | 165 | 2.98e-36 | NTclustered | gi|2916315737|gb|CP181387.1| | 28068 | g2048 | i0 | 78.599 | 11.0452830188679 | 257 | 50 | 95 | 4 | 13 | 265 | 3771175 | 3770920 | Mutant Rubrivivax gelatinosus isolate AJ1, complete genome | blastn | 2927 | 165 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Rubrivivax | Rubrivivax gelatinosus | ||
| 22090184 | 22090184 | PRJNA400171_S_NODE_3538_length_222_cov_2.129534_g3448_i0 | PRJNA400171 | 3538 | 222 | 2.129534 | 4.72756548 | Thauera chlorobenzoica | 96773 | Bacteria | Bacteria | 93.5 | 1.16e-14 | NTclustered | gi|1125918849|gb|CP018839.1| | 96773 | g3448 | i0 | 80.315 | 6.06306306306306 | 127 | 21 | 56 | 4 | 1 | 125 | 3169686 | 3169562 | Thauera chlorobenzoica strain 3CB1 chromosome, complete genome | blastn | 1346 | 93.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Rhodocyclales | Zoogloeaceae | Thauera | Thauera chlorobenzoica | ||
| 23365726 | 23365726 | PRJNA400171_S_NODE_1359_length_306_cov_3.425993_g1269_i0 | PRJNA400171 | 1359 | 306 | 3.425993 | 10.48353858 | Mesorhizobium sp. M7D.F.Ca.US.005.01.1.1 | 2493678 | Bacteria | Bacteria | 52.8 | 0.029 | NTclustered | gi|1537858729|gb|CP034453.1| | 2493678 | g1269 | i0 | 100 | 0.0915032679738562 | 28 | 0 | 9 | 0 | 175 | 202 | 1440972 | 1440999 | Mesorhizobium sp. M7D.F.Ca.US.005.01.1.1 chromosome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Phyllobacteriaceae | Mesorhizobium | Mesorhizobium sp. M7D.F.Ca.US.005.01.1.1 | ||
| 23365902 | 23365902 | PRJNA400171_S_NODE_5879_length_183_cov_3.188312_g5789_i0 | PRJNA400171 | 5879 | 183 | 3.188312 | 5.83461096 | Methylocystis rosea | 173366 | Bacteria | Bacteria | 139 | 1.1599999999999999e-28 | NTclustered | gi|1777407581|gb|CP044328.1| | 173366 | g5789 | i0 | 81.657 | 6.39890710382514 | 169 | 29 | 92 | 2 | 16 | 183 | 449071 | 448904 | Methylocystis rosea strain BRCS1 chromosome, complete genome | blastn | 1171 | 139 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylocystaceae | Methylocystis | Methylocystis rosea | ||
| 23366025 | 23366025 | PRJNA400171_S_NODE_8799_length_155_cov_1.571429_g8709_i0 | PRJNA400171 | 8799 | 155 | 1.571429 | 2.43571495 | Pseudomonas sp. B22129 | 3235111 | Bacteria | Bacteria | 287 | 3.21e-73 | NTclustered | gi|2843770378|gb|CP162592.1| | 3235111 | g8709 | i0 | 100 | 482.954838709677 | 155 | 0 | 100 | 0 | 1 | 155 | 444034 | 444188 | Pseudomonas sp. B22129 chromosome, complete genome | blastn | 74858 | 287 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. B22129 | ||
| 25307133 | 25307133 | PRJNA400171_S_NODE_480_length_428_cov_6.967419_g390_i0 | PRJNA400171 | 480 | 428 | 6.967419 | 29.82055332 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 702 | 0 | NTclustered | gi|2053241888|gb|CP035879.1| | 562 | g390 | i0 | 96.262 | 683.156542056075 | 428 | 16 | 100 | 0 | 1 | 428 | 2908857 | 2908430 | Escherichia coli strain DS26-1 chromosome, complete genome | blastn | 292391 | 702 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 26632268 | 26632268 | PRJNA400171_S_NODE_961_length_343_cov_3.410828_g871_i0 | PRJNA400171 | 961 | 343 | 3.410828 | 11.69914004 | Methylobacterium radiotolerans | 31998 | Bacteria | Bacteria | 128 | 2.71e-36 | NR | PJI51969.1 | 31998 | g871 | i0 | 82.1 | 0.58600583090379 | 67 | 12 | 58.6 | 0 | 39 | 239 | 1 | 67 | PJI51969.1 hypothetical protein CTI14_50510, partial [Methylobacterium radiotolerans] | diamond | 201 | 128 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium radiotolerans | ||
| 26854161 | 26854161 | PRJNA400171_S_NODE_8981_length_153_cov_2.717742_g8891_i0 | PRJNA400171 | 8981 | 153 | 2.717742 | 4.15814526 | Methylobacterium radiotolerans | 31998 | Bacteria | Bacteria | 102 | 1.35e-23 | NR | PJI54188.1 | 31998 | g8891 | i0 | 98 | 1.96078431372549 | 50 | 1 | 98 | 0 | 2 | 151 | 207 | 256 | PJI54188.1 hypothetical protein CTI14_18515 [Methylobacterium radiotolerans] | diamond | 300 | 102 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium radiotolerans | ||
| 26917241 | 26917241 | PRJNA400171_S_NODE_2362_length_256_cov_2.696035_g2272_i0 | PRJNA400171 | 2362 | 256 | 2.696035 | 6.9018496 | Methylobacterium radiotolerans | 31998 | Bacteria | Bacteria | 138 | 9.89e-39 | NR | PJI54401.1 | 31998 | g2272 | i0 | 83.8 | 0.9375 | 80 | 13 | 93.8 | 0 | 240 | 1 | 9 | 88 | PJI54401.1 hypothetical protein CTI14_15935 [Methylobacterium radiotolerans] | diamond | 240 | 138 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium radiotolerans | ||
| 27408449 | 27408449 | PRJNA400171_S_NODE_7823_length_163_cov_2.261194_g7733_i0 | PRJNA400171 | 7823 | 163 | 2.261194 | 3.68574622 | Burkholderiales | 80840 | Bacteria | Bacteria | 70.1 | 2.73e-12 | NR | WP_128901930.1 | 2497863 | g7733 | i0 | 66.7 | 5.96319018404908 | 54 | 17 | 97.5 | 1 | 3 | 161 | 234 | 287 | WP_128901930.1 arsenical pump-driving ATPase [Janthinobacterium sp. 17J80-10] | diamond | 972 | 70.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Janthinobacterium | Janthinobacterium sp. 17J80-10 | ||
| 27440082 | 27440082 | PRJNA400171_S_NODE_3043_length_234_cov_4.390244_g2953_i0 | PRJNA400171 | 3043 | 234 | 4.390244 | 10.27317096 | Bacteria | 2 | Bacteria | Bacteria | 55.1 | 1.32e-6 | NR | WP_121584097.1 | 1827501 | g2953 | i0 | 51.1 | 1.71794871794872 | 45 | 22 | 57.7 | 0 | 136 | 2 | 1 | 45 | WP_121584097.1 STM4504/CBY_0614 family protein [Mesorhizobium sp. YM1C-6-2] | diamond | 402 | 55.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Phyllobacteriaceae | Mesorhizobium | Mesorhizobium sp. YM1C-6-2 | ||
| 27959776 | 27959776 | PRJNA400171_S_NODE_7185_length_169_cov_2.357143_g7095_i0 | PRJNA400171 | 7185 | 169 | 2.357143 | 3.98357167 | Ancylobacter sp. | 1872567 | Bacteria | Bacteria | 41.2 | 0.0491 | NR | HEY9212371.1 | 1872567 | g7095 | i0 | 46.8 | 0.834319526627219 | 47 | 23 | 79.9 | 2 | 157 | 23 | 303 | 349 | HEY9212371.1 hypothetical protein [Ancylobacter sp.] | diamond | 141 | 41.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Xanthobacteraceae | Ancylobacter | Ancylobacter sp. | ||
| 28054455 | 28054455 | PRJNA400171_S_NODE_1185_length_320_cov_3.024055_g1095_i0 | PRJNA400171 | 1185 | 320 | 3.024055 | 9.676976 | Luteimonas salinisoli | 2752307 | Bacteria | Bacteria | 59.3 | 1.33e-7 | NR | WP_180677994.1 | 2752307 | g1095 | i0 | 48.5 | 1.6125 | 68 | 33 | 61.9 | 1 | 208 | 11 | 341 | 408 | WP_180677994.1 hypothetical protein [Luteimonas salinisoli] | diamond | 516 | 59.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Luteimonas | Luteimonas salinisoli | ||
| 28370232 | 28370232 | PRJNA400171_S_NODE_126_length_762_cov_3.852660_g62_i0 | PRJNA400171 | 126 | 762 | 3.85266 | 29.3572692 | Jannaschia formosa | 2259592 | Bacteria | Bacteria | 47.8 | 0.0242 | NR | WP_115384024.1 | 2259592 | g62 | i0 | 35.7 | 0.846456692913386 | 98 | 58 | 37 | 3 | 283 | 2 | 91 | 187 | WP_115384024.1 class I SAM-dependent methyltransferase [Jannaschia formosa] | diamond | 645 | 47.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Roseobacteraceae | Jannaschia | Jannaschia formosa | ||
| 28528351 | 28528351 | PRJNA400171_S_NODE_2327_length_257_cov_23.394737_g2237_i0 | PRJNA400171 | 2327 | 257 | 23.394737 | 60.12447409 | Roseomonas mucosa | 207340 | Bacteria | Bacteria | 51.2 | 1.5e-6 | NR | MDU7525378.1 | 207340 | g2237 | i0 | 100 | 0.245136186770428 | 21 | 0 | 24.5 | 0 | 253 | 191 | 15 | 35 | MDU7525378.1 hypothetical protein [Roseomonas mucosa] | diamond | 63 | 51.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Acetobacterales | Roseomonadaceae | Roseomonas | Roseomonas mucosa | ||
| 28970229 | 28970229 | PRJNA400171_S_NODE_2208_length_262_cov_2.549356_g2118_i0 | PRJNA400171 | 2208 | 262 | 2.549356 | 6.67931272 | Bradyrhizobium sp. S3.9.2 | 3156432 | Bacteria | Bacteria | 79 | 1.4e-16 | NR | WP_354099622.1 | 3156432 | g2118 | i0 | 82.2 | 3.56106870229008 | 45 | 8 | 51.5 | 0 | 127 | 261 | 14 | 58 | WP_354099622.1 hypothetical protein [Bradyrhizobium sp. S3.9.2] | diamond | 933 | 79 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium sp. S3.9.2 | ||
| 29033602 | 29033602 | PRJNA400171_S_NODE_548_length_412_cov_4.772846_g458_i0 | PRJNA400171 | 548 | 412 | 4.772846 | 19.66412552 | Methylobacterium radiotolerans | 31998 | Bacteria | Bacteria | 175 | 5.38e-53 | NR | PJI53365.1 | 31998 | g458 | i0 | 95.5 | 0.640776699029126 | 88 | 4 | 64.1 | 0 | 411 | 148 | 90 | 177 | PJI53365.1 hypothetical protein CTI14_29605 [Methylobacterium radiotolerans] | diamond | 264 | 175 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium radiotolerans | ||
| 29145093 | 29145093 | PRJNA400171_S_NODE_4229_length_208_cov_2.284916_g4139_i0 | PRJNA400171 | 4229 | 208 | 2.284916 | 4.75262528 | Bacteria | 2 | Bacteria | Bacteria | 128 | 1.04e-32 | NR | PJI54188.1 | 31998 | g4139 | i0 | 100 | 1.99038461538462 | 69 | 0 | 99.5 | 0 | 208 | 2 | 358 | 426 | PJI54188.1 hypothetical protein CTI14_18515 [Methylobacterium radiotolerans] | diamond | 414 | 128 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium radiotolerans | ||
| 29222969 | 29222969 | PRJNA400171_S_NODE_6289_length_178_cov_3.308725_g6199_i0 | PRJNA400171 | 6289 | 178 | 3.308725 | 5.8895305 | Candidatus Paracaedibacteraceae bacterium | 2746922 | Bacteria | Bacteria | 63.9 | 4.28e-10 | NR | MDP3372021.1 | 2746922 | g6199 | i0 | 54.9 | 5.52808988764045 | 51 | 23 | 86 | 0 | 176 | 24 | 272 | 322 | MDP3372021.1 GDP-mannose 4,6-dehydratase [Candidatus Paracaedibacteraceae bacterium] | diamond | 984 | 63.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Holosporales | Candidatus Paracaedibacteraceae | Candidatus Paracaedibacteraceae bacterium | |||
| 29380642 | 29380642 | PRJNA400171_S_NODE_1289_length_311_cov_3.329787_g1199_i0 | PRJNA400171 | 1289 | 311 | 3.329787 | 10.35563757 | Seohaeicola zhoushanensis | 1569283 | Bacteria | Bacteria | 136 | 8.85e-35 | NR | MFD2855723.1 | 1569283 | g1199 | i0 | 62.1 | 4.96784565916399 | 103 | 39 | 99.4 | 0 | 309 | 1 | 194 | 296 | MFD2855723.1 DUF1156 domain-containing protein [Seohaeicola zhoushanensis] | diamond | 1545 | 136 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Roseobacteraceae | Seohaeicola | Seohaeicola zhoushanensis | ||
| 29428711 | 29428711 | PRJNA400171_S_NODE_7229_length_168_cov_3.640288_g7139_i0 | PRJNA400171 | 7229 | 168 | 3.640288 | 6.11568384 | Bacteria | 2 | Bacteria | Bacteria | 120 | 6.3000000000000005e-30 | NR | PJI54188.1 | 31998 | g7139 | i0 | 100 | 1.96428571428571 | 55 | 0 | 98.2 | 0 | 166 | 2 | 260 | 314 | PJI54188.1 hypothetical protein CTI14_18515 [Methylobacterium radiotolerans] | diamond | 330 | 120 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium radiotolerans | ||
| 29428713 | 29428713 | PRJNA400171_S_NODE_869_length_357_cov_3.033537_g779_i0 | PRJNA400171 | 869 | 357 | 3.033537 | 10.82972709 | Bacteria | 2 | Bacteria | Bacteria | 249 | 2.16e-77 | NR | PJI54188.1 | 31998 | g779 | i0 | 100 | 2 | 119 | 0 | 100 | 0 | 357 | 1 | 95 | 213 | PJI54188.1 hypothetical protein CTI14_18515 [Methylobacterium radiotolerans] | diamond | 714 | 249 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium radiotolerans | ||
| 29649525 | 29649525 | PRJNA400171_S_NODE_4190_length_208_cov_3.435754_g4100_i0 | PRJNA400171 | 4190 | 208 | 3.435754 | 7.14636832 | Bacteria | 2 | Bacteria | Bacteria | 142 | 6.73e-38 | NR | PJI54188.1 | 31998 | g4100 | i0 | 100 | 1.96153846153846 | 68 | 0 | 98.1 | 0 | 3 | 206 | 514 | 581 | PJI54188.1 hypothetical protein CTI14_18515 [Methylobacterium radiotolerans] | diamond | 408 | 142 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium radiotolerans | ||
| 29664446 | 29664446 | PRJNA400171_S_NODE_3810_length_216_cov_2.679144_g3720_i0 | PRJNA400171 | 3810 | 216 | 2.679144 | 5.78695104 | Neisseria shayeganii | 607712 | Bacteria | Bacteria | 45.8 | 0.00223 | NR | WP_040660049.1 | 607712 | g3720 | i0 | 50 | 0.722222222222222 | 52 | 23 | 68.1 | 1 | 186 | 40 | 71 | 122 | WP_040660049.1 tape measure protein [Neisseria shayeganii] | diamond | 156 | 45.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Neisseriaceae | Neisseria | Neisseria shayeganii | ||
| 29727693 | 29727693 | PRJNA400171_S_NODE_250_length_551_cov_4.892720_g172_i0 | PRJNA400171 | 250 | 551 | 4.89272 | 26.9588872 | Beggiatoa sp. PS | 422289 | Bacteria | Bacteria | 106 | 1.84e-25 | NR | EDN68253.1 | 422289 | g172 | i0 | 44.6 | 0.707803992740472 | 130 | 61 | 69.7 | 2 | 384 | 1 | 15 | 135 | EDN68253.1 conserved hypothetical protein [Beggiatoa sp. PS] | diamond | 390 | 106 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Thiotrichales | Thiotrichaceae | Beggiatoa | Beggiatoa sp. PS | ||
| 30075290 | 30075290 | PRJNA400171_S_NODE_2712_length_244_cov_2.916279_g2622_i0 | PRJNA400171 | 2712 | 244 | 2.916279 | 7.11572076 | Burkholderia cepacia | 292 | Bacteria | Bacteria | 70.1 | 1.09e-12 | NR | WP_081078293.1 | 292 | g2622 | i0 | 47 | 3.01229508196721 | 83 | 41 | 98.4 | 1 | 241 | 2 | 90 | 172 | WP_081078293.1 NUMOD4 domain-containing protein [Burkholderia cepacia] | diamond | 735 | 70.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderia | Burkholderia cepacia | ||
| 30106908 | 30106908 | PRJNA400171_S_NODE_6012_length_182_cov_2.503268_g5922_i0 | PRJNA400171 | 6012 | 182 | 2.503268 | 4.55594776 | Methylobacterium radiotolerans | 31998 | Bacteria | Bacteria | 112 | 1.81e-29 | NR | PJI53153.1 | 31998 | g5922 | i0 | 85 | 0.989010989010989 | 60 | 9 | 98.9 | 0 | 2 | 181 | 79 | 138 | PJI53153.1 hypothetical protein CTI14_32365 [Methylobacterium radiotolerans] | diamond | 180 | 112 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium radiotolerans | ||
| 30170060 | 30170060 | PRJNA400171_S_NODE_3992_length_212_cov_3.054645_g3902_i0 | PRJNA400171 | 3992 | 212 | 3.054645 | 6.4758474 | Pseudoxanthomonas sp. SE1 | 1664560 | Bacteria | Bacteria | 42.4 | 0.035 | NR | WP_277729393.1 | 1664560 | g3902 | i0 | 40.3 | 0.94811320754717 | 67 | 36 | 94.8 | 1 | 1 | 201 | 157 | 219 | WP_277729393.1 beta strand repeat-containing protein [Pseudoxanthomonas sp. SE1] | diamond | 201 | 42.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Pseudoxanthomonas | Pseudoxanthomonas sp. SE1 | ||
| 30218436 | 30218436 | PRJNA400171_S_NODE_2792_length_241_cov_3.476415_g2702_i0 | PRJNA400171 | 2792 | 241 | 3.476415 | 8.37816015 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 45.1 | 0.00535 | NR | WP_322516554.1 | 1076 | g2702 | i0 | 44.2 | 1.29460580912863 | 43 | 24 | 53.5 | 0 | 5 | 133 | 190 | 232 | WP_322516554.1 HNH endonuclease [Rhodopseudomonas palustris] | diamond | 312 | 45.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Rhodopseudomonas | Rhodopseudomonas palustris | ||
| 30675585 | 30675585 | PRJNA400171_S_NODE_8133_length_160_cov_2.465649_g8043_i0 | PRJNA400171 | 8133 | 160 | 2.465649 | 3.9450384 | Chitinibacter bivalviorum | 2739434 | Bacteria | Bacteria | 60.5 | 6.75e-9 | NR | WP_179358082.1 | 2739434 | g8043 | i0 | 50.9 | 0.99375 | 53 | 26 | 99.4 | 0 | 2 | 160 | 528 | 580 | WP_179358082.1 lamin tail domain-containing protein [Chitinibacter bivalviorum] | diamond | 159 | 60.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Chitinibacteraceae | Chitinibacter | Chitinibacter bivalviorum | ||
| 31149240 | 31149240 | PRJNA400171_S_NODE_7515_length_166_cov_2.233577_g7425_i0 | PRJNA400171 | 7515 | 166 | 2.233577 | 3.70773782 | methane-oxidizing endosymbiont of Gigantopelta aegis | 2794938 | Bacteria | Bacteria | 61.2 | 3.01e-9 | NR | WP_198243424.1 | 2794938 | g7425 | i0 | 62 | 3.56024096385542 | 50 | 19 | 90.4 | 0 | 161 | 12 | 4 | 53 | WP_198243424.1 LysR family transcriptional regulator [methane-oxidizing endosymbiont of Gigantopelta aegis] | diamond | 591 | 61.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | methane-oxidizing endosymbiont of Gigantopelta aegis | |||||
| 31466087 | 31466087 | PRJNA400171_S_NODE_2116_length_265_cov_3.576271_g2026_i0 | PRJNA400171 | 2116 | 265 | 3.576271 | 9.47711815 | Skermanella mucosa | 1789672 | Bacteria | Bacteria | 53.5 | 7.57e-6 | NR | WP_202685638.1 | 1789672 | g2026 | i0 | 42.5 | 0.826415094339623 | 73 | 42 | 82.6 | 0 | 224 | 6 | 52 | 124 | WP_202685638.1 effector-associated domain EAD1-containing protein [Skermanella mucosa] | diamond | 219 | 53.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Azospirillaceae | Skermanella | Skermanella mucosa | ||
| 31592590 | 31592590 | PRJNA400171_S_NODE_1796_length_281_cov_2.757937_g1706_i0 | PRJNA400171 | 1796 | 281 | 2.757937 | 7.74980297 | Variovorax paradoxus | 34073 | Bacteria | Bacteria | 59.7 | 5.3e-9 | NR | WP_208510797.1 | 34073 | g1706 | i0 | 79.3 | 0.309608540925267 | 29 | 6 | 31 | 0 | 276 | 190 | 87 | 115 | WP_208510797.1 nuclear transport factor 2 family protein [Variovorax paradoxus] | diamond | 87 | 59.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 31640690 | 31640690 | PRJNA400171_S_NODE_956_length_344_cov_2.726984_g866_i0 | PRJNA400171 | 956 | 344 | 2.726984 | 9.38082496 | Bacteria | 2 | Bacteria | Bacteria | 45.1 | 0.0192 | NR | MDX2263429.1 | 1909294 | g866 | i0 | 30.2 | 2.33720930232558 | 106 | 64 | 88.1 | 3 | 312 | 10 | 421 | 521 | MDX2263429.1 DUF4214 domain-containing protein [Hyphomicrobiales bacterium] | diamond | 804 | 45.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Hyphomicrobiales bacterium | ||||
| 32003723 | 32003723 | PRJNA400171_S_NODE_6218_length_179_cov_2.846667_g6128_i0 | PRJNA400171 | 6218 | 179 | 2.846667 | 5.09553393 | Methylobacterium radiotolerans | 31998 | Bacteria | Bacteria | 112 | 2.4599999999999996e-29 | NR | PJI53153.1 | 31998 | g6128 | i0 | 91.5 | 0.988826815642458 | 59 | 5 | 98.9 | 0 | 3 | 179 | 100 | 158 | PJI53153.1 hypothetical protein CTI14_32365 [Methylobacterium radiotolerans] | diamond | 177 | 112 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium radiotolerans | ||
| 32130393 | 32130393 | PRJNA400171_S_NODE_3018_length_235_cov_2.941748_g2928_i0 | PRJNA400171 | 3018 | 235 | 2.941748 | 6.9131078 | Methylobacterium radiotolerans | 31998 | Bacteria | Bacteria | 105 | 3.62e-24 | NR | PJI54188.1 | 31998 | g2928 | i0 | 98.5 | 0.829787234042553 | 65 | 1 | 83 | 0 | 41 | 235 | 1 | 65 | PJI54188.1 hypothetical protein CTI14_18515 [Methylobacterium radiotolerans] | diamond | 195 | 105 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium radiotolerans | ||
| 32351933 | 32351933 | PRJNA400171_S_NODE_5899_length_183_cov_2.818182_g5809_i0 | PRJNA400171 | 5899 | 183 | 2.818182 | 5.15727306 | Alphaproteobacteria bacterium | 1913988 | Bacteria | Bacteria | 51.2 | 8.43e-6 | NR | HUX80640.1 | 1913988 | g5809 | i0 | 46.2 | 0.852459016393443 | 52 | 28 | 85.2 | 0 | 168 | 13 | 118 | 169 | HUX80640.1 hypothetical protein [Alphaproteobacteria bacterium] | diamond | 156 | 51.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Alphaproteobacteria bacterium | |||||
| 32415109 | 32415109 | PRJNA400171_S_NODE_3639_length_219_cov_3.184211_g3549_i0 | PRJNA400171 | 3639 | 219 | 3.184211 | 6.97342209 | Ensifer sp. BRP08 | 2793825 | Bacteria | Bacteria | 47.4 | 5.86e-4 | NR | MCA1408637.1 | 2793825 | g3549 | i0 | 88.9 | 0.36986301369863 | 27 | 3 | 37 | 0 | 81 | 1 | 1 | 27 | MCA1408637.1 hypothetical protein [Ensifer sp. BRP08] | diamond | 81 | 47.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Ensifer | Ensifer sp. BRP08 | ||
| 32510179 | 32510179 | PRJNA400171_S_NODE_6599_length_175_cov_2.883562_g6509_i0 | PRJNA400171 | 6599 | 175 | 2.883562 | 5.0462335 | Abyssibacter sp. | 2320200 | Bacteria | Bacteria | 59.7 | 1.49e-8 | NR | WP_347205419.1 | 2320200 | g6509 | i0 | 50.9 | 1.97142857142857 | 57 | 28 | 97.7 | 0 | 3 | 173 | 271 | 327 | WP_347205419.1 alginate O-acetyltransferase AlgX-related protein [Abyssibacter sp.] | diamond | 345 | 59.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Chromatiales | Oceanococcaceae | Abyssibacter | Abyssibacter sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;