contig_metadata
3 rows where bioproject = "PRJNA400171" and tax_phylum = "Chordata"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4241003 | 4241003 | PRJNA400171_S_NODE_8184_length_160_cov_1.343511_g8094_i0 | PRJNA400171 | 8184 | 160 | 1.343511 | 2.1496176 | Mus musculus | 10090 | Chordata | Chordata | 296 | 5.55e-76 | NTclustered | gi|30315762|gb|AC020786.20| | 10090 | g8094 | i0 | 100 | 1 | 160 | 0 | 100 | 0 | 1 | 160 | 62514 | 62355 | Mus musculus chromosome 7, clone RP23-178G8, complete sequence | blastn | 160 | 296 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 30486205 | 30486205 | PRJNA400171_S_NODE_4373_length_205_cov_2.869318_g4283_i0 | PRJNA400171 | 4373 | 205 | 2.869318 | 5.8821019 | Marmota monax | 9995 | Chordata | Chordata | 43.1 | 0.0154 | NR | KAF7472254.1 | 9995 | g4283 | i0 | 45.3 | 0.775609756097561 | 53 | 29 | 77.6 | 0 | 162 | 4 | 152 | 204 | KAF7472254.1 hypothetical protein GHT09_016740 [Marmota monax] | diamond | 159 | 43.1 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Sciuridae | Marmota | Marmota monax | |
| 32257136 | 32257136 | PRJNA400171_S_NODE_2478_length_252_cov_2.098655_g2388_i0 | PRJNA400171 | 2478 | 252 | 2.098655 | 5.2886106 | Callorhinchus milii | 7868 | Chordata | Chordata | 43.5 | 0.0236 | NR | XP_042198495.1 | 7868 | g2388 | i0 | 33.8 | 0.880952380952381 | 74 | 45 | 88.1 | 1 | 252 | 31 | 819 | 888 | XP_042198495.1 serine/threonine-protein kinase LMTK1 [Callorhinchus milii] | diamond | 222 | 43.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Chondrichthyes | Chimaeriformes | Callorhinchidae | Callorhinchus | Callorhinchus milii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;