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contig_metadata

28 rows where bioproject = "PRJNA400171" and tax_kingdom = "Fungi"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Fungi · 28 ✖

tax_clade 1

bioproject 1

  • PRJNA400171 · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1081029 1081029 PRJNA400171_S_NODE_5321_length_190_cov_16.341615_g5231_i0 PRJNA400171 5321 190 16.341615 31.0490685 Sarocladiaceae 2502719 Fungi Fungi 351 1.4399999999999997e-92   NTclustered gi|219960400|gb|FJ567940.1| 175243 g5231 i0 100 100.015789473684 190 0 100 0 1 190 479 668 Uncultured Ascomycota clone A8YN12RM1 large subunit ribosomal RNA gene, partial sequence blastn 19003 351 1 Eukaryota Opisthokonta Fungi Ascomycota         uncultured Ascomycota
1688533 1688533 PRJNA400171_S_NODE_2822_length_240_cov_3.331754_g2732_i0 PRJNA400171 2822 240 3.331754 7.9962096 Malassezia restricta 76775 Fungi Fungi 438 1.4199999999999995e-118   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g2732 i0 99.583 98.8083333333333 240 1 100 0 1 240 3217 2978 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 23714 438 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
3631795 3631795 PRJNA400171_S_NODE_4183_length_208_cov_6.608939_g4093_i0 PRJNA400171 4183 208 6.608939 13.74659312 Sarocladiaceae 2502719 Fungi Fungi 385 1.58e-102   NTclustered gi|308219083|gb|GQ867783.1| 885939 g4093 i0 100 103.725961538462 208 0 100 0 1 208 3563 3770 Acremonium sp. 11665 DLW-2010 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 21575 385 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales   Acremonium Acremonium sp. 11665 DLW-2010
3631796 3631796 PRJNA400171_S_NODE_6743_length_173_cov_8.701389_g6653_i0 PRJNA400171 6743 173 8.701389 15.05340297 Malassezia 55193 Fungi Fungi 315 1.68e-81   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g6653 i0 99.422 104.023121387283 173 1 100 0 1 173 2418 2590 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 17996 315 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
4240962 4240962 PRJNA400171_S_NODE_7164_length_169_cov_2.771429_g7074_i0 PRJNA400171 7164 169 2.771429 4.68371501 Pleurotus ostreatus 5322 Fungi Fungi 313 5.859999999999999e-81   NTclustered gi|148358037|gb|DQ071722.2| 5322 g7074 i0 100 101.92899408284 169 0 100 0 1 169 1615 1783 Pleurotus ostreatus voucher TUB 011571 28S large subunit ribosomal RNA gene, partial sequence blastn 17226 313 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Pleurotaceae Pleurotus Pleurotus ostreatus
5517387 5517387 PRJNA400171_S_NODE_1745_length_283_cov_18.846457_g1655_i0 PRJNA400171 1745 283 18.846457 53.33547331 uncultured Trichocomaceae 209467 Fungi Fungi 477 3.639999999999999e-130   NTclustered gi|70002617|gb|DQ069873.1| 209467 g1655 i0 97.183 99.9151943462898 284 5 100 3 1 283 298 17 Uncultured Trichocomaceae clone RFLP13 18S ribosomal RNA gene, partial sequence blastn 28276 477 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Trichocomaceae   uncultured Trichocomaceae
5517616 5517616 PRJNA400171_S_NODE_7225_length_168_cov_8.064748_g7135_i0 PRJNA400171 7225 168 8.064748 13.54877664 Acremonium sp. 11665 DLW-2010 885939 Fungi Fungi 305 9.81e-79   NTclustered gi|308219083|gb|GQ867783.1| 885939 g7135 i0 99.405 90.4940476190476 168 1 100 0 1 168 4277 4110 Acremonium sp. 11665 DLW-2010 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 15203 305 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales   Acremonium Acremonium sp. 11665 DLW-2010
5517659 5517659 PRJNA400171_S_NODE_8185_length_159_cov_11.615385_g8095_i0 PRJNA400171 8185 159 11.615385 18.46846215 Scedosporium apiospermum 563466 Fungi Fungi 283 4.29e-72   NTclustered gi|225134686|gb|FJ345358.1| 563466 g8095 i0 98.742 104.465408805031 159 2 100 0 1 159 4537 4695 Scedosporium apiospermum strain ATCC 28206 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 16610 283 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Microascales Microascaceae Scedosporium Scedosporium apiospermum
6791446 6791446 PRJNA400171_S_NODE_3286_length_227_cov_11.646465_g3196_i0 PRJNA400171 3286 227 11.646465 26.43747555 Fusarium phaseoli 120645 Fungi Fungi 411 2.8999999999999996e-110   NTclustered gi|90436895|gb|DQ452435.1| 120645 g3196 i0 100 97.7577092511013 222 0 98 0 6 227 1 222 Fusarium phaseoli strain MAFF 305607 28S ribosomal RNA gene and 28S-18S ribosomal RNA intergenic spacer, partial sequence blastn 22191 411 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Nectriaceae Fusarium Fusarium phaseoli
7458915 7458915 PRJNA400171_S_NODE_1666_length_288_cov_10.671815_g1576_i0 PRJNA400171 1666 288 10.671815 30.7348272 Eukaryota 2759 Fungi Fungi 436 6.300000000000001e-118   NTclustered gi|371927160|gb|JQ350757.1| 175245 g1576 i0 94.097 1951.86805555556 288 15 99 2 1 287 414 700 Uncultured fungus clone HS4 18S ribosomal RNA gene, partial sequence blastn 562138 436 1 Eukaryota Opisthokonta Fungi           uncultured fungus
8067069 8067069 PRJNA400171_S_NODE_4187_length_208_cov_4.273743_g4097_i0 PRJNA400171 4187 208 4.273743 8.88938544 Alternaria alternata 5599 Fungi Fungi 385 1.58e-102   NTclustered gi|2791117515|gb|PQ217832.1| 5599 g4097 i0 100 107.634615384615 208 0 100 0 1 208 3936 3729 Alternaria alternata isolate Karbala-1 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and external transcribed spacer, partial sequence blastn 22388 385 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria alternata
8733794 8733794 PRJNA400171_S_NODE_1687_length_287_cov_3.507752_g1597_i0 PRJNA400171 1687 287 3.507752 10.06724824 Scopulariopsis 40374 Fungi Fungi 508 1.31e-139   NTclustered gi|670734118|gb|KJ443118.1| 186361 g1597 i0 98.944 115.693379790941 284 3 99 0 1 284 1757 1474 Scopulariopsis fusca strain G414 28S large subunit ribosomal RNA gene, partial sequence blastn 33204 510 0.996078431372549 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Microascales Microascaceae Scopulariopsis Scopulariopsis fusca
10009053 10009053 PRJNA400171_S_NODE_2828_length_240_cov_3.066351_g2738_i0 PRJNA400171 2828 240 3.066351 7.3592424 Ceratobasidiaceae 5250 Fungi Fungi 444 3.05e-120   NTclustered gi|1473260339|gb|MH873283.1| 107832 g2738 i0 100 99.9916666666667 240 0 100 0 1 240 414 175 Thanatephorus cucumeris culture CBS:700.82 strain CBS 700.82 large subunit ribosomal RNA gene, partial sequence blastn 23998 444 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Cantharellales Ceratobasidiaceae Thanatephorus Thanatephorus cucumeris
11284279 11284279 PRJNA400171_S_NODE_1729_length_284_cov_6.984314_g1639_i0 PRJNA400171 1729 284 6.984314 19.83545176 Malassezia 55193 Fungi Fungi 508 1.29e-139   NTclustered gi|1042812810|gb|KT351778.1| 76775 g1639 i0 98.944 99.9683098591549 284 3 100 0 1 284 23 306 Malassezia restricta isolate contig100_19323 26S ribosomal RNA gene, partial sequence blastn 28391 508 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
13167624 13167624 PRJNA400171_S_NODE_6571_length_175_cov_3.623288_g6481_i0 PRJNA400171 6571 175 3.623288 6.340754 Malassezia restricta 76775 Fungi Fungi 324 2.83e-84   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g6481 i0 100 30.2 175 0 100 0 1 175 1868 1694 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 5285 324 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
13834479 13834479 PRJNA400171_S_NODE_2511_length_250_cov_6.339367_g2421_i0 PRJNA400171 2511 250 6.339367 15.8484175 Ascomycota 4890 Fungi Fungi 449 6.87e-122   NTclustered gi|2119889156|gb|OK577963.1| 1715220 g2421 i0 99.197 99.992 249 2 99 0 2 250 959 711 Alternaria sp. isolate LC2 small subunit ribosomal RNA gene, partial sequence blastn 24998 449 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria sp.
13834480 13834480 PRJNA400171_S_NODE_271_length_537_cov_17.570866_g192_i0 PRJNA400171 271 537 17.570866 94.35555042 Ascomycota 4890 Fungi Fungi 915 0   NTclustered gi|1020738212|emb|LT549088.1| 45277 g192 i0 97.398 100.048417132216 538 13 100 1 1 537 29 566 Sarocladium kiliense genomic DNA sequence contains 18S rRNA gene, ITS1 and 5.8S rRNA gene, ITS2 and 28S rRNA gene, isolate G2-16 blastn 53726 915 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Sarocladiaceae Sarocladium Sarocladium kiliense
14442671 14442671 PRJNA400171_S_NODE_4292_length_206_cov_20.129944_g4202_i0 PRJNA400171 4292 206 20.129944 41.46768464 Acremonium sp. 11665 DLW-2010 885939 Fungi Fungi 364 2.0399999999999993e-96   NTclustered gi|308219083|gb|GQ867783.1| 885939 g4202 i0 98.544 104.004854368932 206 3 100 0 1 206 4489 4694 Acremonium sp. 11665 DLW-2010 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 21425 364 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales   Acremonium Acremonium sp. 11665 DLW-2010
15108750 15108750 PRJNA400171_S_NODE_6652_length_174_cov_10.627586_g6562_i0 PRJNA400171 6652 174 10.627586 18.49199964 Sarocladium 284134 Fungi Fungi 322 1.01e-83   NTclustered gi|157366947|gb|EU119045.1| 175243 g6562 i0 100 100 174 0 100 0 1 174 37 210 Uncultured ascomycete clone Biofilm3-16 small subunit ribosomal RNA gene, partial sequence blastn 17400 322 1 Eukaryota Opisthokonta Fungi Ascomycota         uncultured Ascomycota
16991227 16991227 PRJNA400171_S_NODE_2114_length_265_cov_21.576271_g2024_i0 PRJNA400171 2114 265 21.576271 57.17711815 Corollospora maritima 45810 Fungi Fungi 472 1.5699999999999998e-128   NTclustered gi|363544765|gb|JN941653.1| 45810 g2024 i0 98.864 99.622641509434 264 3 99 0 1 264 709 972 Corollospora maritima strain NBRC 32118 18S ribosomal RNA (SSU) gene, partial sequence blastn 26400 472 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Microascales Halosphaeriaceae Corollospora Corollospora maritima
17658536 17658536 PRJNA400171_S_NODE_7314_length_167_cov_10.717391_g7224_i0 PRJNA400171 7314 167 10.717391 17.89804297 Kordyana 190071 Fungi Fungi 292 7.58e-75   NTclustered gi|253721508|gb|GQ253358.1| 175245 g7224 i0 98.214 100.059880239521 168 2 100 1 1 167 308 141 Uncultured fungus clone W918 18S ribosomal RNA gene, partial sequence blastn 16710 292 1 Eukaryota Opisthokonta Fungi           uncultured fungus
21482682 21482682 PRJNA400171_S_NODE_4657_length_200_cov_11.964912_g4567_i0 PRJNA400171 4657 200 11.964912 23.929824 Microascaceae 5593 Fungi Fungi 364 1.96e-96   NTclustered gi|1829519787|gb|MT312850.1| 129317 g4567 i0 99.5 100 200 1 100 0 1 200 763 564 Enterocarpus grenotii strain DTO 401-A9 large subunit ribosomal RNA gene, partial sequence blastn 20000 364 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Microascales Microascaceae Enterocarpus Enterocarpus grenotii
22757931 22757931 PRJNA400171_S_NODE_4978_length_195_cov_10.686747_g4888_i0 PRJNA400171 4978 195 10.686747 20.83915665 Sarocladiaceae 2502719 Fungi Fungi 361 2.46e-95   NTclustered gi|308219083|gb|GQ867783.1| 885939 g4888 i0 100 100.005128205128 195 0 100 0 1 195 3752 3946 Acremonium sp. 11665 DLW-2010 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 19501 361 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales   Acremonium Acremonium sp. 11665 DLW-2010
22757932 22757932 PRJNA400171_S_NODE_6378_length_177_cov_9.601351_g6288_i0 PRJNA400171 6378 177 9.601351 16.99439127 Ascomycota 4890 Fungi Fungi 327 2.2199999999999996e-85   NTclustered gi|12697549|dbj|AB024046.1| 89487 g6288 i0 100 100 177 0 100 0 1 177 560 736 Basipetospora chlamydospora gene for 18S ribosomal RNA blastn 17700 327 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Microascales   Basipetospora Basipetospora chlamydospora
23365888 23365888 PRJNA400171_S_NODE_5459_length_188_cov_9.018868_g5369_i0 PRJNA400171 5459 188 9.018868 16.95547184 Scedosporium apiospermum 563466 Fungi Fungi 263 6.839999999999999e-66   NTclustered gi|225134686|gb|FJ345358.1| 563466 g5369 i0 92.021 98.7606382978723 188 14 100 1 1 188 4856 4670 Scedosporium apiospermum strain ATCC 28206 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 18567 263 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Microascales Microascaceae Scedosporium Scedosporium apiospermum
23365899 23365899 PRJNA400171_S_NODE_5799_length_184_cov_18.045161_g5709_i0 PRJNA400171 5799 184 18.045161 33.20309624 Geopyxis carbonaria 49969 Fungi Fungi 324 3.01e-84   NTclustered gi|6017885|gb|AF104665.1|AF104665 49969 g5709 i0 98.37 100.005434782609 184 3 100 0 1 184 1578 1395 Geopyxis carbonaria 18S ribosomal RNA gene, complete sequence blastn 18401 324 1 Eukaryota Opisthokonta Fungi Ascomycota Pezizomycetes Pezizales Tarzettaceae Geopyxis Geopyxis carbonaria
24032738 24032738 PRJNA400171_S_NODE_8079_length_160_cov_19.175573_g7989_i0 PRJNA400171 8079 160 19.175573 30.6809168 Ascomycota 4890 Fungi Fungi 285 1.2e-72   NTclustered gi|175749|gb|M89782.1|PUCRRNA 5597 g7989 i0 98.75 100 160 2 100 0 1 160 1232 1391 Pseudalllescheria boydii partial 18S ribosomal RNA sequence blastn 16000 285 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Microascales Microascaceae Scedosporium Scedosporium boydii
29176551 29176551 PRJNA400171_S_NODE_5049_length_194_cov_3.854545_g4959_i0 PRJNA400171 5049 194 3.854545 7.4778173 root 1 Root_unresolved Root_unresolved 45.4 0.00218   NR KAJ7441831.1 71905 g4959 i0 42.3 1.25257731958763 52 30 80.4 0 188 33 106 157 KAJ7441831.1 hypothetical protein B0H11DRAFT_1932750 [Mycena galericulata] diamond 243 45.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Mycenaceae Mycena Mycena galericulata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;