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contig_metadata

21 rows where bioproject = "PRJNA399711" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 21 ✖

bioproject 1

  • PRJNA399711 · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25563276 25563276 PRJNA399711_S_NODE_36937_length_222_cov_2.275676_g36795_i0 PRJNA399711 36937 222 2.275676 5.05200072 Methanosphaera sp. ISO3-F5 1452353 Archaea Archaea 52.8 0.02   NTclustered gi|2695672541|gb|CP118754.2| 1452353 g36795 i0 100 0.126126126126126 28 0 13 0 174 201 141713 141740 Methanosphaera sp. ISO3-F5 plasmid pNP174, complete sequence blastn 28 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp. ISO3-F5
25697956 25697956 PRJNA399711_S_NODE_10458_length_341_cov_2.496711_g10316_i0 PRJNA399711 10458 341 2.496711 8.51378451 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 70.5 1.29e-11   NR MEK9698159.1 2163009 g10316 i0 52.3 1.38123167155425 65 31 57.2 0 337 143 29 93 MEK9698159.1 hypothetical protein [Candidatus Poseidoniales archaeon] diamond 471 70.5 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
26106159 26106159 PRJNA399711_S_NODE_100133_length_155_cov_1.720339_g99991_i0 PRJNA399711 100133 155 1.720339 2.66652545 Vulcanisaeta moutnovskia 768-28 985053 Archaea Archaea 52.8 0.013   NTclustered gi|323706731|gb|CP002529.1| 985053 g99991 i0 100 0.180645161290323 28 0 18 0 30 57 336100 336127 Vulcanisaeta moutnovskia 768-28, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta moutnovskia
26242509 26242509 PRJNA399711_S_NODE_107126_length_151_cov_2.877193_g106984_i0 PRJNA399711 107126 151 2.877193 4.34456143 Halobaculum limi 3031916 Archaea Archaea 52.8 0.012   NTclustered gi|2471356524|gb|CP120468.1| 3031916 g106984 i0 100 0.185430463576159 28 0 19 0 35 62 499995 499968 Halobaculum limi strain YSMS11 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halobaculum Halobaculum limi
26518085 26518085 PRJNA399711_S_NODE_95920_length_157_cov_3.991667_g95778_i0 PRJNA399711 95920 157 3.991667 6.26691719 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 244 1.99e-60   NTclustered gi|937513727|gb|CP012850.1| 1353260 g95778 i0 94.872 0.993630573248408 156 8 99 0 1 156 2030528 2030373 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 156 244 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
28023068 28023068 PRJNA399711_P_NODE_11685_length_188_cov_2.006623_g11619_i0 PRJNA399711 11685 188 2.006623 3.77245124 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 86.7 3.31e-18   NR MCK9569285.1 2026773 g11619 i0 67.2 0.925531914893617 58 19 92.6 0 176 3 223 280 MCK9569285.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 174 86.7 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
28275442 28275442 PRJNA399711_P_NODE_7406_length_214_cov_3.519774_g7340_i0 PRJNA399711 7406 214 3.519774 7.53231636 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 44.3 0.00742   NR MAG28463.1 2026773 g7340 i0 43.3 0.939252336448598 67 35 91.1 2 5 199 523 588 MAG28463.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 201 44.3 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
30454888 30454888 PRJNA399711_P_NODE_11633_length_188_cov_2.860927_g11567_i0 PRJNA399711 11633 188 2.860927 5.37854276 Candidatus Methanomethylicaceae archaeon 2282146 Archaea Archaea 42 0.0335   NR MEM2001436.1 3058293 g11567 i0 50 0.51063829787234 32 16 51.1 0 7 102 100 131 MEM2001436.1 glycosyltransferase [Candidatus Methanomethylicaceae archaeon] diamond 96 42 1 Archaea   Thermoproteati Candidatus Methanomethylicota Candidatus Methanomethylicia Candidatus Methanomethylicales Candidatus Methanomethylicaceae   Candidatus Methanomethylicaceae archaeon
30675569 30675569 PRJNA399711_P_NODE_18793_length_166_cov_2.325581_g18727_i0 PRJNA399711 18793 166 2.325581 3.86046446 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 93.6 5.779999999999999e-23   NR MCJ7636226.1 2169593 g18727 i0 96 1.80722891566265 50 2 90.4 0 2 151 33 82 MCJ7636226.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 300 93.6 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
30833693 30833693 PRJNA399711_P_NODE_14114_length_177_cov_30.185714_g14048_i0 PRJNA399711 14114 177 30.185714 53.42871378 Candidatus Jordarchaeales archaeon 3058035 Archaea Archaea 40.4 0.0348   NR MEM1513227.1 3058035 g14048 i0 52.8 0.610169491525424 36 16 59.3 1 33 137 71 106 MEM1513227.1 hypothetical protein [Candidatus Jordarchaeales archaeon] diamond 108 40.4 1 Archaea   Promethearchaeati   Candidatus Jordarchaeia Candidatus Jordarchaeales     Candidatus Jordarchaeales archaeon
32934556 32934556 PRJNA399711_S_NODE_11009_length_335_cov_7.932886_g10867_i0 PRJNA399711 11009 335 7.932886 26.5751681 Methanocaldococcus jannaschii 2190 Archaea Archaea 75.1 4.52e-15   NR WP_064496856.1 2190 g10867 i0 76.2 0.564179104477612 63 15 56.4 0 48 236 28 90 WP_064496856.1 hypothetical protein [Methanocaldococcus jannaschii] diamond 189 75.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus jannaschii
33003391 33003391 PRJNA399711_S_NODE_82699_length_166_cov_2.364341_g82557_i0 PRJNA399711 82699 166 2.364341 3.92480606 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 117 7.240000000000001e-29   NR HET8793525.1 2169593 g82557 i0 94.5 11.9277108433735 55 3 99.4 0 166 2 461 515 HET8793525.1 ABC transporter substrate-binding protein [Nitrososphaeraceae archaeon] diamond 1980 117 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
33020184 33020184 PRJNA399711_S_NODE_44428_length_208_cov_1.777778_g44286_i0 PRJNA399711 44428 208 1.777778 3.69777824 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 123 1.9099999999999998e-31   NR MDW0258915.1 2169593 g44286 i0 100 0.995192307692308 69 0 99.5 0 207 1 256 324 MDW0258915.1 IS1634 family transposase [Nitrososphaeraceae archaeon] diamond 207 123 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
33037457 33037457 PRJNA399711_S_NODE_73372_length_173_cov_3.514706_g73230_i0 PRJNA399711 73372 173 3.514706 6.08044138 Methanobacterium sp. 2164 Archaea Archaea 45.1 0.00222   NR MCC7564369.1 2164 g73230 i0 100 0.416184971098266 24 0 41.6 0 100 171 1 24 MCC7564369.1 hypothetical protein [Methanobacterium sp.] diamond 72 45.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
33054534 33054534 PRJNA399711_S_NODE_81637_length_167_cov_1.161538_g81495_i0 PRJNA399711 81637 167 1.161538 1.93976846 Nitrosopumilaceae archaeon 2202732 Archaea Archaea 67.4 1.5e-11   NR NIU02294.1 2202732 g81495 i0 58.5 0.952095808383233 53 22 95.2 0 165 7 75 127 NIU02294.1 hypothetical protein [Nitrosopumilaceae archaeon] diamond 159 67.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae   Nitrosopumilaceae archaeon
33060674 33060674 PRJNA399711_S_NODE_50397_length_198_cov_6.931677_g50255_i0 PRJNA399711 50397 198 6.931677 13.72472046 Archaea 2157 Archaea Archaea 43.1 0.0157   NR HIO94141.1 2163009 g50255 i0 41.1 2.57575757575758 56 33 84.8 0 4 171 193 248 HIO94141.1 aconitate hydratase AcnA [Candidatus Poseidoniales archaeon] diamond 510 43.1 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
33088182 33088182 PRJNA399711_S_NODE_107014_length_151_cov_3.175439_g106872_i0 PRJNA399711 107014 151 3.175439 4.79491289 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 83.6 2.28e-17   NR MBI4738261.1 2026803 g106872 i0 80 0.993377483443709 50 10 99.3 0 150 1 215 264 MBI4738261.1 hypothetical protein [Candidatus Woesearchaeota archaeon] diamond 150 83.6 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
33088812 33088812 PRJNA399711_S_NODE_96982_length_157_cov_0.941667_g96840_i0 PRJNA399711 96982 157 0.941667 1.47841719 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 87.4 6.4e-19   NR HEX6671336.1 2169593 g96840 i0 76.5 0.974522292993631 51 12 97.5 0 155 3 159 209 HEX6671336.1 site-specific integrase [Nitrososphaeraceae archaeon] diamond 153 87.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
33111895 33111895 PRJNA399711_S_NODE_84534_length_164_cov_14.062992_g84392_i0 PRJNA399711 84534 164 14.062992 23.06330688 Thermoproteati 1783275 Archaea Archaea 111 7.77e-28   NR MDP9305080.1 2056631 g84392 i0 100 3.95121951219512 54 0 98.8 0 1 162 68 121 MDP9305080.1 isocitrate/isopropylmalate dehydrogenase family protein [Thermoproteota archaeon] diamond 648 111 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
33173664 33173664 PRJNA399711_S_NODE_18888_length_281_cov_3.938525_g18746_i0 PRJNA399711 18888 281 3.938525 11.06725525 archaeon 1906665 Archaea Archaea 88.2 5.4e-19   NR MDP2438326.1 1906665 g18746 i0 55.6 0.864768683274021 81 33 84.3 2 269 33 157 236 MDP2438326.1 proteasome subunit beta [archaeon] diamond 243 88.2 1 Archaea               archaeon
33173811 33173811 PRJNA399711_S_NODE_39096_length_217_cov_12.505556_g38954_i0 PRJNA399711 39096 217 12.505556 27.13705652 Methanomethylophilus alvi 1291540 Archaea Archaea 41.6 0.0344   NR WP_400256085.1 1291540 g38954 i0 38.2 0.76036866359447 55 25 63.6 2 60 197 79 133 WP_400256085.1 hypothetical protein [Methanomethylophilus alvi] diamond 165 41.6 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomethylophilaceae Methanomethylophilus Methanomethylophilus alvi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;