contig_metadata
5 rows where bioproject = "PRJNA399711" and tax_phylum = "Pisuviricota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25564759 | 25564759 | PRJNA399711_S_NODE_76985_length_170_cov_3.654135_g76843_i0 | PRJNA399711 | 76985 | 170 | 3.654135 | 6.2120295 | Danio blood picornavirus/Zebrafish picornavirus 2 | 3063761 | Viruses | Viruses | 257 | 2.81e-64 | NTclustered | gi|2551699335|gb|OK619588.1| | 3063761 | g76843 | i0 | 95.625 | 0.941176470588235 | 160 | 7 | 94 | 0 | 10 | 169 | 2501 | 2342 | Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds | blastn | 160 | 257 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Danio blood picornavirus/Zebrafish picornavirus 2 | |||
| 26107428 | 26107428 | PRJNA399711_S_NODE_2925_length_500_cov_32.933045_g2804_i0 | PRJNA399711 | 2925 | 500 | 32.933045 | 164.665225 | Danio blood picornavirus/Zebrafish picornavirus 2 | 3063761 | Viruses | Viruses | 671 | 0 | NTclustered | gi|2551699335|gb|OK619588.1| | 3063761 | g2804 | i0 | 91.093 | 0.988 | 494 | 42 | 99 | 1 | 1 | 494 | 6617 | 7108 | Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds | blastn | 494 | 671 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Danio blood picornavirus/Zebrafish picornavirus 2 | |||
| 33003076 | 33003076 | PRJNA399711_S_NODE_3003_length_497_cov_5.139130_g2881_i0 | PRJNA399711 | 3003 | 497 | 5.13913 | 25.5414761 | Danio blood picornavirus/Zebrafish picornavirus 2 | 3063761 | Viruses | Viruses | 181 | 1.92e-49 | NR | AVM87439.1 | 3063761 | g2881 | i0 | 51.8 | 1.01408450704225 | 168 | 74 | 97.2 | 1 | 494 | 12 | 973 | 1140 | AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] | diamond | 504 | 181 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Danio blood picornavirus/Zebrafish picornavirus 2 | ||||
| 33071568 | 33071568 | PRJNA399711_S_NODE_87517_length_162_cov_7.472000_g87375_i0 | PRJNA399711 | 87517 | 162 | 7.472 | 12.10464 | Soniwok virus | 3131542 | Viruses | Viruses | 69.3 | 5.32e-12 | NR | WZH61574.1 | 3131542 | g87375 | i0 | 73.7 | 0.703703703703704 | 38 | 10 | 70.4 | 0 | 162 | 49 | 489 | 526 | WZH61574.1 MAG: RNA-dependent RNA polymerase [Soniwok virus] | diamond | 114 | 69.3 | 1 | Viruses | Orthornavirae | Pisuviricota | Duplopiviricetes | Durnavirales | Partitiviridae | Soniwok virus | |||
| 33094939 | 33094939 | PRJNA399711_S_NODE_5302_length_420_cov_11.856397_g5161_i0 | PRJNA399711 | 5302 | 420 | 11.856397 | 49.796867399999996 | Gammapartitivirus | 1511811 | Viruses | Viruses | 130 | 3.54e-33 | NR | YP_271923.1 | 296210 | g5161 | i0 | 55.2 | 1.47857142857143 | 105 | 47 | 75 | 0 | 8 | 322 | 316 | 420 | YP_271923.1 putative capsid protein [Penicillium stoloniferum virus F] | diamond | 621 | 130 | 1 | Viruses | Orthornavirae | Pisuviricota | Duplopiviricetes | Durnavirales | Partitiviridae | Gammapartitivirus | Gammapartitivirus effepenicillii |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;