contig_metadata
10 rows where bioproject = "PRJNA399711", tax_kingdom = "Pseudomonadati" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25698010 | 25698010 | PRJNA399711_S_NODE_106442_length_151_cov_6.640351_g106300_i0 | PRJNA399711 | 106442 | 151 | 6.640351 | 10.02693001 | Pendulispora rubella | 2741070 | Bacteria | Bacteria | 176 | 7.009999999999999e-40 | NTclustered | gi|2698045512|gb|CP089929.1| | 2741070 | g106300 | i0 | 93.966 | 94.6026490066225 | 116 | 7 | 77 | 0 | 35 | 150 | 7289886 | 7290001 | Pendulispora rubella strain MSr11368 chromosome, complete genome | blastn | 14285 | 176 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora rubella | ||
| 25896692 | 25896692 | PRJNA399711_S_NODE_49051_length_200_cov_6.141104_g48909_i0 | PRJNA399711 | 49051 | 200 | 6.141104 | 12.282208 | root | 1 | Root_unresolved | Root_unresolved | 52.8 | 0.017 | NTclustered | gi|1566495190|gb|CP012670.1| | 56 | g48909 | i0 | 96.875 | 0.48 | 32 | 0 | 16 | 1 | 44 | 75 | 4511827 | 4511797 | Sorangium cellulosum strain So ceGT47 chromosome, complete genome | blastn | 96 | 52.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 32958501 | 32958501 | PRJNA399711_S_NODE_73114_length_173_cov_5.323529_g72972_i0 | PRJNA399711 | 73114 | 173 | 5.323529 | 9.20970517 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 94.7 | 1.41e-21 | NR | MCU0694604.1 | 2268199 | g72972 | i0 | 75 | 2.89595375722543 | 56 | 14 | 97.1 | 0 | 168 | 1 | 82 | 137 | MCU0694604.1 2-hydroxyacid dehydrogenase [Polyangiaceae bacterium] | diamond | 501 | 95.5 | 0.991623036649215 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 33037398 | 33037398 | PRJNA399711_S_NODE_63012_length_183_cov_2.876712_g62870_i0 | PRJNA399711 | 63012 | 183 | 2.876712 | 5.26438296 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 72.4 | 5.92e-13 | NR | MCU0657377.1 | 2268199 | g62870 | i0 | 75.6 | 1.47540983606557 | 45 | 11 | 73.8 | 0 | 49 | 183 | 100 | 144 | MCU0657377.1 FAD-dependent oxidoreductase [Polyangiaceae bacterium] | diamond | 270 | 72.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 33060641 | 33060641 | PRJNA399711_S_NODE_31029_length_236_cov_3.572864_g30887_i0 | PRJNA399711 | 31029 | 236 | 3.572864 | 8.43195904 | Myxococcia | 32015 | Bacteria | Bacteria | 82.8 | 2.01e-16 | NR | MSP16943.1 | 2026763 | g30887 | i0 | 53.5 | 4.69067796610169 | 71 | 33 | 90.3 | 0 | 22 | 234 | 53 | 123 | MSP16943.1 hypothetical protein [Myxococcales bacterium] | diamond | 1107 | 82.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 33060666 | 33060666 | PRJNA399711_S_NODE_44453_length_208_cov_1.520468_g44311_i0 | PRJNA399711 | 44453 | 208 | 1.520468 | 3.16257344 | Myxococcales | 29 | Bacteria | Bacteria | 107 | 4.08e-25 | NR | HET7784814.1 | 2026763 | g44311 | i0 | 75.4 | 4.97596153846154 | 69 | 17 | 99.5 | 0 | 2 | 208 | 74 | 142 | HET7784814.1 efflux RND transporter permease subunit [Myxococcales bacterium] | diamond | 1035 | 107 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 33071431 | 33071431 | PRJNA399711_S_NODE_65565_length_180_cov_5.622378_g65423_i0 | PRJNA399711 | 65565 | 180 | 5.622378 | 10.1202804 | Labilithrix sp. | 1971228 | Bacteria | Bacteria | 48.5 | 1.4e-4 | NR | MBX3208776.1 | 1971228 | g65423 | i0 | 49.1 | 1.76666666666667 | 53 | 27 | 88.3 | 0 | 178 | 20 | 227 | 279 | MBX3208776.1 NAD(P)-dependent glycerol-3-phosphate dehydrogenase [Labilithrix sp.] | diamond | 318 | 48.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix sp. | |||
| 33105261 | 33105261 | PRJNA399711_S_NODE_101510_length_154_cov_2.726496_g101368_i0 | PRJNA399711 | 101510 | 154 | 2.726496 | 4.19880384 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 94 | 2.9400000000000003e-21 | NR | HEU4407434.1 | 2268199 | g101368 | i0 | 93.8 | 0.935064935064935 | 48 | 3 | 93.5 | 0 | 154 | 11 | 291 | 338 | HEU4407434.1 ParA family protein [Polyangiaceae bacterium] | diamond | 144 | 94 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 33139755 | 33139755 | PRJNA399711_S_NODE_64487_length_181_cov_6.763889_g64345_i0 | PRJNA399711 | 64487 | 181 | 6.763889 | 12.24263909 | Kofleriaceae bacterium | 2212474 | Bacteria | Bacteria | 40.8 | 0.0313 | NR | MEO8843631.1 | 2212474 | g64345 | i0 | 41.3 | 0.76243093922651906 | 46 | 26 | 76.2 | 1 | 139 | 2 | 25 | 69 | MEO8843631.1 pyridoxal-phosphate dependent enzyme [Kofleriaceae bacterium] | diamond | 138 | 40.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Kofleriaceae bacterium | ||||
| 33173932 | 33173932 | PRJNA399711_S_NODE_58408_length_188_cov_3.370861_g58266_i0 | PRJNA399711 | 58408 | 188 | 3.370861 | 6.33721868 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 88.2 | 1.74e-18 | NR | MEZ0314579.1 | 2818507 | g58266 | i0 | 84.8 | 1.46808510638298 | 46 | 7 | 73.4 | 0 | 186 | 49 | 85 | 130 | MEZ0314579.1 MXAN_5808 family serine peptidase [Myxococcota bacterium] | diamond | 276 | 88.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;