RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA399711", tax_kingdom = "Methanobacteriati" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 3 ✖

tax_kingdom 1

  • Methanobacteriati · 3 ✖

bioproject 1

  • PRJNA399711 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25697956 25697956 PRJNA399711_S_NODE_10458_length_341_cov_2.496711_g10316_i0 PRJNA399711 10458 341 2.496711 8.51378451 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 70.5 1.29e-11   NR MEK9698159.1 2163009 g10316 i0 52.3 1.38123167155425 65 31 57.2 0 337 143 29 93 MEK9698159.1 hypothetical protein [Candidatus Poseidoniales archaeon] diamond 471 70.5 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
33060674 33060674 PRJNA399711_S_NODE_50397_length_198_cov_6.931677_g50255_i0 PRJNA399711 50397 198 6.931677 13.72472046 Archaea 2157 Archaea Archaea 43.1 0.0157   NR HIO94141.1 2163009 g50255 i0 41.1 2.57575757575758 56 33 84.8 0 4 171 193 248 HIO94141.1 aconitate hydratase AcnA [Candidatus Poseidoniales archaeon] diamond 510 43.1 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
33173811 33173811 PRJNA399711_S_NODE_39096_length_217_cov_12.505556_g38954_i0 PRJNA399711 39096 217 12.505556 27.13705652 Methanomethylophilus alvi 1291540 Archaea Archaea 41.6 0.0344   NR WP_400256085.1 1291540 g38954 i0 38.2 0.76036866359447 55 25 63.6 2 60 197 79 133 WP_400256085.1 hypothetical protein [Methanomethylophilus alvi] diamond 165 41.6 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomethylophilaceae Methanomethylophilus Methanomethylophilus alvi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;