RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA399711", tax_kingdom = "Metazoa" and tax_phylum = "Placozoa"

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tax_superkingdom 1

tax_phylum 1

  • Placozoa · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA399711 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
33037378 33037378 PRJNA399711_S_NODE_59108_length_187_cov_5.253333_g58966_i0 PRJNA399711 59108 187 5.253333 9.82373271 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 58.2 6.23e-9   NR XP_002114202.1 10228 g58966 i0 81.3 2.50267379679144 32 6 51.3 0 184 89 84 115 XP_002114202.1 expressed hypothetical protein [Trichoplax adhaerens] diamond 468 58.2 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
33094857 33094857 PRJNA399711_S_NODE_104342_length_152_cov_9.904348_g104200_i0 PRJNA399711 104342 152 9.904348 15.05460896 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 57 9.66e-9   NR RDD45377.1 287889 g104200 i0 58.8 2.01315789473684 51 20 98.7 1 3 152 48 98 RDD45377.1 Protein C10 [Trichoplax sp. H2] diamond 306 57.4 0.993031358885017 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax sp. H2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;