RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA399711", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA399711 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32992617 32992617 PRJNA399711_S_NODE_74603_length_172_cov_3.162963_g74461_i0 PRJNA399711 74603 172 3.162963 5.44029636 Hepatosporidae 3075347 Fungi Fungi 86.7 4.66e-18   NR ORD98978.1 1081669 g74461 i0 63 3.76744186046512 54 20 94.2 0 9 170 204 257 ORD98978.1 SYVC [Hepatospora eriocheir] diamond 648 86.7 1 Eukaryota Opisthokonta Fungi Microsporidia     Hepatosporidae Hepatospora Hepatospora eriocheir
33122506 33122506 PRJNA399711_S_NODE_35871_length_224_cov_3.187166_g35729_i0 PRJNA399711 35871 224 3.187166 7.13925184 Edhazardia aedis USNM 41457 1003232 Fungi Fungi 42 0.0475   NR EJW01949.1 1003232 g35729 i0 41.9 0.830357142857143 62 32 81.7 2 6 188 106 164 EJW01949.1 hypothetical protein EDEG_03575 [Edhazardia aedis USNM 41457] diamond 186 42 1 Eukaryota Opisthokonta Fungi Microsporidia     Culicosporidae Edhazardia Edhazardia aedis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;