RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

27 rows where bioproject = "PRJNA399711", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 27 ✖

tax_kingdom 1

  • Bacillati · 27 ✖

bioproject 1

  • PRJNA399711 · 27 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25836167 25836167 PRJNA399711_S_NODE_54091_length_193_cov_6.121795_g53949_i0 PRJNA399711 54091 193 6.121795 11.81506435 Fimbriimonas ginsengisoli Gsoil 348 661478 Bacteria Bacteria 91.6 3.53e-14   NTclustered gi|663071213|gb|CP007139.1| 661478 g53949 i0 86.047 2.49740932642487 86 11 44 1 61 145 2888728 2888813 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 482 91.6 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
26106308 26106308 PRJNA399711_S_NODE_104941_length_152_cov_3.513043_g104799_i0 PRJNA399711 104941 152 3.513043 5.33982536 Armatimonadota bacterium 2033014 Bacteria Bacteria 114 3.97e-28   NR MBC8102058.1 2033014 g104799 i0 98 0.986842105263158 50 1 98.7 0 1 150 225 274 MBC8102058.1 cysteine--tRNA ligase [Armatimonadota bacterium] diamond 150 114 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32951772 32951772 PRJNA399711_S_NODE_108786_length_150_cov_4.345133_g108644_i0 PRJNA399711 108786 150 4.345133 6.5176995 Armatimonadota bacterium 2033014 Bacteria Bacteria 96.7 1.04e-21   NR MBC8104835.1 2033014 g108644 i0 85.7 1.94 49 7 98 0 2 148 505 553 MBC8104835.1 hypothetical protein [Armatimonadota bacterium] diamond 291 96.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32952068 32952068 PRJNA399711_S_NODE_49266_length_200_cov_3.306748_g49124_i0 PRJNA399711 49266 200 3.306748 6.613496 Armatimonadota bacterium 2033014 Bacteria Bacteria 59.3 1.55e-8   NR MCD6351159.1 2033014 g49124 i0 57.8 0.675 45 19 67.5 0 189 55 11 55 MCD6351159.1 hypothetical protein [Armatimonadota bacterium] diamond 135 59.3 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32952092 32952092 PRJNA399711_S_NODE_52074_length_196_cov_3.352201_g51932_i0 PRJNA399711 52074 196 3.352201 6.57031396 Armatimonadota bacterium 2033014 Bacteria Bacteria 80.5 4.07e-16   NR MBC7807659.1 2033014 g51932 i0 66.7 1.85204081632653 60 19 90.3 1 191 15 106 165 MBC7807659.1 cytidine deaminase [Armatimonadota bacterium] diamond 363 80.5 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32958374 32958374 PRJNA399711_S_NODE_101162_length_154_cov_3.905983_g101020_i0 PRJNA399711 101162 154 3.905983 6.01521382 Bacteria 2 Bacteria Bacteria 43.9 0.00192   NR MBW3637136.1 2033014 g101020 i0 44.9 1.71428571428571 49 27 95.5 0 4 150 22 70 MBW3637136.1 UPF0182 family protein [Armatimonadota bacterium] diamond 264 43.9 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32969185 32969185 PRJNA399711_S_NODE_39634_length_216_cov_11.905028_g39492_i0 PRJNA399711 39634 216 11.905028 25.71486048 Armatimonadota bacterium 2033014 Bacteria Bacteria 85.1 2.95e-17   NR MES2465338.1 2033014 g39492 i0 63.4 0.986111111111111 71 26 98.6 0 215 3 157 227 MES2465338.1 sigma-70 family RNA polymerase sigma factor [Armatimonadota bacterium] diamond 213 85.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32969390 32969390 PRJNA399711_S_NODE_72602_length_174_cov_1.948905_g72460_i0 PRJNA399711 72602 174 1.948905 3.3910947 Armatimonadota bacterium 2033014 Bacteria Bacteria 65.1 1.72e-10   NR MBC8139937.1 2033014 g72460 i0 51.9 1.87931034482759 54 22 93.1 1 164 3 143 192 MBC8139937.1 cellulase family glycosylhydrolase [Armatimonadota bacterium] diamond 327 65.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32969472 32969472 PRJNA399711_S_NODE_87050_length_163_cov_1.761905_g86908_i0 PRJNA399711 87050 163 1.761905 2.87190515 Armatimonadota bacterium 2033014 Bacteria Bacteria 61.2 3.78e-9   NR MES2463209.1 2033014 g86908 i0 84.8 0.607361963190184 33 5 60.7 0 1 99 10 42 MES2463209.1 TonB-dependent receptor [Armatimonadota bacterium] diamond 99 61.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32969483 32969483 PRJNA399711_S_NODE_88458_length_162_cov_1.864000_g88316_i0 PRJNA399711 88458 162 1.864 3.01968 Armatimonadota bacterium 2033014 Bacteria Bacteria 87.4 1.45e-18   NR MES1227149.1 2033014 g88316 i0 83 0.981481481481482 53 9 98.1 0 161 3 40 92 MES1227149.1 IS3 family transposase [Armatimonadota bacterium] diamond 159 87.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32986207 32986207 PRJNA399711_S_NODE_42811_length_210_cov_12.184971_g42669_i0 PRJNA399711 42811 210 12.184971000000001 25.5884391 Armatimonadota bacterium 2033014 Bacteria Bacteria 114 3.3600000000000003e-29   NR MES2464747.1 2033014 g42669 i0 74.3 2 70 18 100 0 210 1 160 229 MES2464747.1 protein phosphatase 2C domain-containing protein [Armatimonadota bacterium] diamond 420 114 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32986244 32986244 PRJNA399711_S_NODE_48467_length_201_cov_4.682927_g48325_i0 PRJNA399711 48467 201 4.682927 9.41268327 Armatimonadota bacterium 2033014 Bacteria Bacteria 87 5.25e-18   NR MES2462485.1 2033014 g48325 i0 77.2 0.850746268656716 57 13 85.1 0 200 30 810 866 MES2462485.1 DNA gyrase subunit A [Armatimonadota bacterium] diamond 171 87 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
33003099 33003099 PRJNA399711_S_NODE_34275_length_228_cov_0.989529_g34133_i0 PRJNA399711 34275 228 0.989529 2.25612612 Capsulimonas sp. 2494211 Bacteria Bacteria 53.1 4.21e-6   NR MCW3058866.1 2494211 g34133 i0 36.5 0.973684210526316 74 46 97.4 1 5 226 28 100 MCW3058866.1 hypothetical protein [Capsulimonas sp.] diamond 222 53.1 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas Capsulimonas sp.
33019950 33019950 PRJNA399711_S_NODE_109388_length_150_cov_2.522124_g109246_i0 PRJNA399711 109388 150 2.522124 3.783186 Armatimonadota bacterium 2033014 Bacteria Bacteria 53.1 1.64e-6   NR MBC7807358.1 2033014 g109246 i0 59.1 0.88 44 18 88 0 147 16 190 233 MBC7807358.1 hypothetical protein [Armatimonadota bacterium] diamond 132 53.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
33020460 33020460 PRJNA399711_S_NODE_89012_length_161_cov_7.008065_g88870_i0 PRJNA399711 89012 161 7.008065 11.28298465 Armatimonadota bacterium 2033014 Bacteria Bacteria 97.1 1.41e-24   NR MES2460440.1 2033014 g88870 i0 97.9 0.894409937888199 48 1 89.4 0 159 16 55 102 MES2460440.1 50S ribosomal protein L21 [Armatimonadota bacterium] diamond 144 97.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
33026660 33026660 PRJNA399711_S_NODE_102196_length_154_cov_1.273504_g102054_i0 PRJNA399711 102196 154 1.273504 1.96119616 Bacillati 1783272 Bacteria Bacteria 83.6 1.89e-17   NR MBV9851412.1 2033014 g102054 i0 77.1 1.87012987012987 48 11 93.5 0 11 154 160 207 MBV9851412.1 Gfo/Idh/MocA family oxidoreductase [Armatimonadota bacterium] diamond 288 84.3 0.991696322657177 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
33071011 33071011 PRJNA399711_S_NODE_10525_length_340_cov_4.864686_g10383_i0 PRJNA399711 10525 340 4.864686 16.5399324 Armatimonadota bacterium 2033014 Bacteria Bacteria 74.7 7.1e-13   NR MCC7437351.1 2033014 g10383 i0 38.7 0.979411764705882 111 67 97.1 1 335 6 875 985 MCC7437351.1 DNA polymerase III subunit alpha [Armatimonadota bacterium] diamond 333 74.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
33071406 33071406 PRJNA399711_S_NODE_61037_length_185_cov_3.810811_g60895_i0 PRJNA399711 61037 185 3.810811 7.05000035 Armatimonadota bacterium 2033014 Bacteria Bacteria 53.1 2.67e-6   NR MBC8104362.1 2033014 g60895 i0 57.6 0.956756756756757 59 15 82.7 2 1 153 4 60 MBC8104362.1 hypothetical protein [Armatimonadota bacterium] diamond 177 53.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
33071599 33071599 PRJNA399711_S_NODE_94405_length_158_cov_3.223140_g94263_i0 PRJNA399711 94405 158 3.22314 5.0925612 Armatimonadota bacterium 2033014 Bacteria Bacteria 103 3.0799999999999994e-24   NR MBC8103165.1 2033014 g94263 i0 90.4 0.987341772151899 52 5 98.7 0 157 2 354 405 MBC8103165.1 hypothetical protein [Armatimonadota bacterium] diamond 156 103 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
33105410 33105410 PRJNA399711_S_NODE_25774_length_252_cov_3.437209_g25632_i0 PRJNA399711 25774 252 3.437209 8.66176668 Armatimonadota bacterium 2033014 Bacteria Bacteria 137 1.22e-35   NR MBC7809042.1 2033014 g25632 i0 78.6 1 84 18 100 0 252 1 208 291 MBC7809042.1 polyribonucleotide nucleotidyltransferase [Armatimonadota bacterium] diamond 252 137 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
33105519 33105519 PRJNA399711_S_NODE_41494_length_213_cov_2.636364_g41352_i0 PRJNA399711 41494 213 2.636364 5.61545532 Armatimonadota bacterium 2033014 Bacteria Bacteria 99 8.13e-23   NR MES2459244.1 2033014 g41352 i0 71.2 0.929577464788732 66 19 93 0 14 211 214 279 MES2459244.1 relaxase/mobilization nuclease domain-containing protein [Armatimonadota bacterium] diamond 198 99 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
33105767 33105767 PRJNA399711_S_NODE_82742_length_166_cov_2.232558_g82600_i0 PRJNA399711 82742 166 2.232558 3.70604628 Armatimonadota bacterium 2033014 Bacteria Bacteria 113 1.11e-27   NR MES2459559.1 2033014 g82600 i0 100 1.98795180722892 55 0 99.4 0 2 166 303 357 MES2459559.1 DUF87 domain-containing protein [Armatimonadota bacterium] diamond 330 113 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
33156570 33156570 PRJNA399711_S_NODE_43552_length_209_cov_5.476744_g43410_i0 PRJNA399711 43552 209 5.476744 11.44639496 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 74.7 1.27e-13   NR HTQ09779.1 2682144 g43410 i0 47.8 0.990430622009569 69 36 99 0 2 208 521 589 HTQ09779.1 Qat anti-phage system ATPase QatA [Fimbriimonadaceae bacterium] diamond 207 74.7 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
33156709 33156709 PRJNA399711_S_NODE_65584_length_180_cov_5.363636_g65442_i0 PRJNA399711 65584 180 5.363636 9.6545448 Armatimonadota bacterium 2033014 Bacteria Bacteria 65.1 2.15e-10   NR MDQ3812393.1 2033014 g65442 i0 46.6 1.95 58 31 96.7 0 7 180 307 364 MDQ3812393.1 DUF2339 domain-containing protein [Armatimonadota bacterium] diamond 351 65.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
33156834 33156834 PRJNA399711_S_NODE_83904_length_165_cov_2.687500_g83762_i0 PRJNA399711 83904 165 2.6875 4.434375 Armatimonadota bacterium 2033014 Bacteria Bacteria 102 8.21e-25   NR MES2461330.1 2033014 g83762 i0 97.8 0.836363636363636 46 1 83.6 0 28 165 1 46 MES2461330.1 methyltransferase domain-containing protein [Armatimonadota bacterium] diamond 138 102 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
33173836 33173836 PRJNA399711_S_NODE_42216_length_211_cov_12.919540_g42074_i0 PRJNA399711 42216 211 12.91954 27.2602294 Armatimonadota bacterium 2033014 Bacteria Bacteria 64.7 4.48e-10   NR MES2464979.1 2033014 g42074 i0 42.9 0.995260663507109 70 40 99.5 0 210 1 624 693 MES2464979.1 DNA polymerase III subunit gamma/tau [Armatimonadota bacterium] diamond 210 64.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
33173933 33173933 PRJNA399711_S_NODE_58536_length_188_cov_2.589404_g58394_i0 PRJNA399711 58536 188 2.589404 4.86807952 Capsulimonadaceae bacterium 2953755 Bacteria Bacteria 43.5 0.00974   NR HEY3330736.1 2953755 g58394 i0 51.3 0.622340425531915 39 19 62.2 0 68 184 516 554 HEY3330736.1 TonB-dependent receptor [Capsulimonadaceae bacterium] diamond 117 43.5 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae   Capsulimonadaceae bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;