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contig_metadata

6 rows where bioproject = "PRJNA399711", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA399711 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25562754 25562754 PRJNA399711_S_NODE_25297_length_254_cov_2.156682_g25155_i0 PRJNA399711 25297 254 2.156682 5.47797228 Cryptosporidium ubiquitum 857276 SAR_Eukaryotes SAR_Eukaryotes 174 4.72e-39   NTclustered gi|1624735034|ref|XM_029019898.1| 857276 g25155 i0 86.335 31.748031496063 161 20 63 2 1 160 584 743 Cryptosporidium ubiquitum 60s ribosomal protein L8 L2 (cubi_02887), partial mRNA blastn 8064 174 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium ubiquitum
25565073 25565073 PRJNA399711_S_NODE_86345_length_163_cov_4.357143_g86203_i0 PRJNA399711 86345 163 4.357143 7.10214309 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.014   NTclustered gi|916416461|ref|XM_013374008.1| 5802 g86203 i0 100 0.171779141104294 28 0 17 0 6 33 120 93 Eimeria tenella uncharacterized protein (ETH_00040805), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
25835571 25835571 PRJNA399711_S_NODE_39099_length_217_cov_12.111111_g38957_i0 PRJNA399711 39099 217 12.111111 26.28111087 Eimeria acervulina 5801 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.005   NTclustered gi|914998632|ref|XM_013392170.1| 5801 g38957 i0 89.13 0.341013824884793 46 2 21 1 16 61 1545 1503 Eimeria acervulina glycosylphosphatidylinositol anchor attachment 1 protein, putative partial mRNA blastn 74 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
25837171 25837171 PRJNA399711_S_NODE_82963_length_166_cov_1.519380_g82821_i0 PRJNA399711 82963 166 1.51938 2.5221708 Plasmodium relictum 85471 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.014   NTclustered gi|1620148298|ref|XM_028678236.1| 85471 g82821 i0 100 0.168674698795181 28 0 17 0 137 164 7869 7842 Plasmodium relictum conserved Plasmodium membrane protein, unknown function (PRELSG_1243100), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium relictum
25973577 25973577 PRJNA399711_S_NODE_87972_length_162_cov_3.432000_g87830_i0 PRJNA399711 87972 162 3.432 5.55984 Cystoisospora suis 483139 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.013   NTclustered gi|2795622194|ref|XM_068065127.1| 483139 g87830 i0 96.875 0.197530864197531 32 0 19 1 129 159 398 367 Cystoisospora suis uncharacterized protein (CSUI_004946), partial mRNA blastn 32 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
26515018 26515018 PRJNA399711_S_NODE_16264_length_295_cov_15.837209_g16122_i0 PRJNA399711 16264 295 15.837209 46.71976655 Eimeria acervulina 5801 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|915011600|ref|XM_013396010.1| 5801 g16122 i0 100 0.674576271186441 30 0 10 0 87 116 661 632 Eimeria acervulina hypothetical protein, conserved partial mRNA blastn 199 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;