RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA399711", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA399711 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26245436 26245436 PRJNA399711_S_NODE_7622_length_376_cov_3.961652_g7480_i0 PRJNA399711 7622 376 3.961652 14.89581152 Ignavibacterium album JCM 16511 945713 Bacteria Bacteria 52.8 0.036   NTclustered gi|383800634|gb|CP003418.1| 945713 g7480 i0 94.286 0.0930851063829787 35 1 9 1 236 270 493107 493140 Ignavibacterium album JCM 16511, complete genome blastn 35 52.8 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae Ignavibacterium Ignavibacterium album
27423314 27423314 PRJNA399711_P_NODE_21163_length_157_cov_2.725000_g21097_i0 PRJNA399711 21163 157 2.725 4.27825 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 83.2 6.46e-17   NR MCX6169664.1 2049428 g21097 i0 76.5 0.974522292993631 51 12 97.5 0 2 154 363 413 MCX6169664.1 U32 family peptidase [Ignavibacteriales bacterium] diamond 153 83.2 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;