RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA399711", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 3 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA399711 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32941335 32941335 PRJNA399711_S_NODE_63265_length_183_cov_1.534247_g63123_i0 PRJNA399711 63265 183 1.534247 2.80767201 Bacillati 1783272 Bacteria Bacteria 54.7 2.45e-7   NR HEY9846239.1 2729995 g63123 i0 92.3 0.836065573770492 26 2 42.6 0 1 78 122 147 HEY9846239.1 response regulator [Candidatus Caenarcanales bacterium] diamond 153 54.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria Vampirovibriophyceae Candidatus Caenarcanales     Candidatus Caenarcanales bacterium
33002902 33002902 PRJNA399711_S_NODE_107347_length_151_cov_2.394737_g107205_i0 PRJNA399711 107347 151 2.394737 3.61605287 Candidatus Gastranaerophilaceae bacterium 3022870 Bacteria Bacteria 83.6 4.34e-17   NR HNW26685.1 3022870 g107205 i0 85.4 0.95364238410596 48 7 95.4 0 1 144 152 199 HNW26685.1 excinuclease ABC subunit UvrA [Candidatus Gastranaerophilaceae bacterium] diamond 144 83.6 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Gastranaerophilales Candidatus Gastranaerophilaceae   Candidatus Gastranaerophilaceae bacterium
33173562 33173562 PRJNA399711_S_NODE_10024_length_345_cov_8.149351_g9882_i0 PRJNA399711 10024 345 8.149351 28.11526095 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 162 9e-44   NR MBX9720058.1 2364082 g9882 i0 67.3 1.91304347826087 110 36 95.7 0 332 3 435 544 MBX9720058.1 insulinase family protein [Candidatus Obscuribacterales bacterium] diamond 660 162 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;