RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA399711", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA399711 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32934802 32934802 PRJNA399711_S_NODE_44425_length_208_cov_1.818713_g44283_i0 PRJNA399711 44425 208 1.818713 3.78292304 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 54.7 4.4e-8   NR MET0503429.1 2838779 g44283 i0 94.4 0.778846153846154 54 3 77.9 0 3 164 2 55 MET0503429.1 DUF1328 domain-containing protein [Candidatus Binatia bacterium] diamond 162 54.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
33156774 33156774 PRJNA399711_S_NODE_73960_length_173_cov_1.036765_g73818_i0 PRJNA399711 73960 173 1.036765 1.79360345 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 122 1.78e-30   NR HEY6363595.1 2838779 g73818 i0 100 0.988439306358382 57 0 98.8 0 172 2 175 231 HEY6363595.1 DNA polymerase I [Candidatus Binatia bacterium] diamond 171 122 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;