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contig_metadata

28 rows where bioproject = "PRJNA399711" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 28 ✖

bioproject 1

  • PRJNA399711 · 28 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25837330 25837330 PRJNA399711_S_NODE_87707_length_162_cov_4.992000_g87565_i0 PRJNA399711 87707 162 4.992 8.08704 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 54.7 0.004   NTclustered gi|2621785413|emb|OY781871.1| 2044595 g87565 i0 100 0.351851851851852 29 0 18 0 39 67 246146 246174 MAG: Candidatus Gracilibacteria bacterium isolate aa87c5ac-7a06-4bd6-af26-82c4354fe085 genome assembly, chromosome: 1 blastn 57 54.7 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
25973109 25973109 PRJNA399711_S_NODE_73868_length_173_cov_1.551471_g73726_i0 PRJNA399711 73868 173 1.551471 2.68404483 Candidatus Mycosynbacter amalyticus 2665156 Bacteria Bacteria 209 8.15e-50   NTclustered gi|1799615131|gb|CP045921.1| 2665156 g73726 i0 88.889 107.50289017341 171 17 99 2 1 171 219941 220109 Candidatus Mycosynbacter amalyticus isolate JR1 chromosome, complete genome blastn 18598 209 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota       Candidatus Mycosynbacter Candidatus Mycosynbacter amalyticus
26106176 26106176 PRJNA399711_S_NODE_100557_length_154_cov_18.094017_g100415_i0 PRJNA399711 100557 154 18.094017 27.86478618 Candidatus Saccharimonas sp. 1917697 Bacteria Bacteria 241 2.51e-59   NTclustered gi|2070586293|gb|CP076101.2| 1917697 g100415 i0 94.805 3 154 8 100 0 1 154 204948 205101 MAG: Candidatus Saccharimonas sp. isolate JCVI_32_bin.49 chromosome, complete genome blastn 462 241 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
26109017 26109017 PRJNA399711_S_NODE_69293_length_177_cov_1.842857_g69151_i0 PRJNA399711 69293 177 1.842857 3.26185689 Candidatus Dojkabacteria bacterium 2099670 Bacteria Bacteria 103 1.05e-25   NR GIW57616.1 2099670 g69151 i0 78 1 59 13 100 0 1 177 11 69 GIW57616.1 MAG: 30S ribosomal protein S4 [Candidatus Dojkabacteria bacterium] diamond 177 103 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
26109587 26109587 PRJNA399711_S_NODE_86661_length_163_cov_2.896825_g86519_i0 PRJNA399711 86661 163 2.896825 4.72182475 Candidatus Saccharimonadota 95818 Bacteria Bacteria 94 4.5400000000000005e-22   NR HRK41121.1 2026720 g86519 i0 91.8 42.9018404907975 49 4 90.2 0 148 2 110 158 HRK41121.1 tRNA (guanosine(37)-N1)-methyltransferase TrmD [Candidatus Saccharibacteria bacterium] diamond 6993 94 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
26243973 26243973 PRJNA399711_S_NODE_38422_length_219_cov_2.351648_g38280_i0 PRJNA399711 38422 219 2.351648 5.15010912 Candidatus Saccharimonas sp. 1917697 Bacteria Bacteria 294 2.92e-75   NTclustered gi|2070586293|gb|CP076101.2| 1917697 g38280 i0 91.204 0.986301369863014 216 19 99 0 1 216 54519 54304 MAG: Candidatus Saccharimonas sp. isolate JCVI_32_bin.49 chromosome, complete genome blastn 216 294 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
27454847 27454847 PRJNA399711_P_NODE_17083_length_170_cov_6.563910_g17017_i0 PRJNA399711 17083 170 6.56391 11.158647 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 70.1 3.11e-12   NR MBM4442690.1 2053607 g17017 i0 55 4.28823529411765 60 23 98.8 1 170 3 225 284 MBM4442690.1 alpha/beta fold hydrolase [Candidatus Rokuibacteriota bacterium] diamond 729 70.1 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
27959756 27959756 PRJNA399711_P_NODE_11585_length_188_cov_3.774834_g11519_i0 PRJNA399711 11585 188 3.774834 7.09668792 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 70.5 4.88e-13   NR MDO5343689.1 2026720 g11519 i0 60 1.91489361702128 60 22 92.6 1 187 14 103 162 MDO5343689.1 alpha/beta hydrolase [Candidatus Saccharibacteria bacterium] diamond 360 70.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28292130 28292130 PRJNA399711_P_NODE_7006_length_218_cov_1.988950_g6940_i0 PRJNA399711 7006 218 1.98895 4.335911 Bacteria 2 Bacteria Bacteria 99.4 3.18e-22   NR OGK14087.1 1802027 g6940 i0 77.6 7.3348623853211 67 15 92.2 0 206 6 244 310 OGK14087.1 MAG: hypothetical protein A2859_00670 [Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_01_FULL_37_16b] diamond 1599 99.8 0.995991983967936 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_01_FULL_37_16b
29397363 29397363 PRJNA399711_P_NODE_16649_length_171_cov_3.395522_g16583_i0 PRJNA399711 16649 171 3.395522 5.80634262 Bacteria 2 Bacteria Bacteria 45.8 9.9e-4   NR MEK9165990.1 2052139 g16583 i0 75 1.47368421052632 20 5 35.1 0 162 103 195 214 MEK9165990.1 DNA methyltransferase [Patescibacteria group bacterium] diamond 252 45.8 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
32934647 32934647 PRJNA399711_S_NODE_24273_length_257_cov_8.563636_g24131_i0 PRJNA399711 24273 257 8.563636 22.00854452 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 45.1 0.00661   NR MDA1191141.1 2026781 g24131 i0 46.3 0.478599221789883 41 22 47.9 0 250 128 209 249 MDA1191141.1 exonuclease domain-containing protein [Candidatus Poribacteria bacterium] diamond 123 45.1 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
32934731 32934731 PRJNA399711_S_NODE_34457_length_227_cov_5.010526_g34315_i0 PRJNA399711 34457 227 5.010526 11.37389402 Candidatus Dojkabacteria bacterium 2099670 Bacteria Bacteria 102 2.9e-25   NR MCX8034751.1 2099670 g34315 i0 66.7 1.98237885462555 75 25 99.1 0 3 227 71 145 MCX8034751.1 30S ribosomal protein S4 [Candidatus Dojkabacteria bacterium] diamond 450 102 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
32934802 32934802 PRJNA399711_S_NODE_44425_length_208_cov_1.818713_g44283_i0 PRJNA399711 44425 208 1.818713 3.78292304 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 54.7 4.4e-8   NR MET0503429.1 2838779 g44283 i0 94.4 0.778846153846154 54 3 77.9 0 3 164 2 55 MET0503429.1 DUF1328 domain-containing protein [Candidatus Binatia bacterium] diamond 162 54.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32951993 32951993 PRJNA399711_S_NODE_38970_length_218_cov_2.071823_g38828_i0 PRJNA399711 38970 218 2.071823 4.51657414 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 88.2 3.09e-19   NR HNQ31526.1 2026804 g38828 i0 98 0.674311926605505 49 1 67.4 0 71 217 1 49 HNQ31526.1 hypothetical protein [Candidatus Woesebacteria bacterium] diamond 147 88.2 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
32958424 32958424 PRJNA399711_S_NODE_32114_length_233_cov_3.173469_g31972_i0 PRJNA399711 32114 233 3.173469 7.39418277 Candidatus Mycosynbacter 2831665 Bacteria Bacteria 102 1.67e-24   NR MCA9334820.1 2026720 g31972 i0 68.5 1.931330472103 73 23 94 0 221 3 151 223 MCA9334820.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 450 103 0.990291262135922 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
33003118 33003118 PRJNA399711_S_NODE_37227_length_221_cov_4.940217_g37085_i0 PRJNA399711 37227 221 4.940217 10.91787957 Candidatus Falkowbacteria bacterium HGW-Falkowbacteria-1 2013768 Bacteria Bacteria 41.6 0.0194   NR PKM91311.1 2013768 g37085 i0 48.7 0.529411764705882 39 17 52.9 2 184 68 42 77 PKM91311.1 MAG: hypothetical protein CVU82_01790 [Candidatus Falkowbacteria bacterium HGW-Falkowbacteria-1] diamond 117 41.6 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium HGW-Falkowbacteria-1
33003125 33003125 PRJNA399711_S_NODE_38259_length_219_cov_4.197802_g38117_i0 PRJNA399711 38259 219 4.197802 9.19318638 Candidatus Glassbacteria bacterium 2602803 Bacteria Bacteria 60.5 8.05e-10   NR HUU89496.1 2602803 g38117 i0 50 0.73972602739726 54 26 74 1 162 1 7 59 HUU89496.1 hypothetical protein [Candidatus Glassbacteria bacterium] diamond 162 60.5 1 Bacteria Bacteria candidate phyla   Candidatus Glassiibacteriota         Candidatus Glassbacteria bacterium
33037211 33037211 PRJNA399711_S_NODE_35460_length_225_cov_2.569149_g35318_i0 PRJNA399711 35460 225 2.569149 5.78058525 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 87 5.91e-19   NR MEI6811056.1 2052152 g35318 i0 62.7 1 75 28 100 0 225 1 137 211 MEI6811056.1 hypothetical protein [Candidatus Nomurabacteria bacterium] diamond 225 87 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
33043749 33043749 PRJNA399711_S_NODE_77492_length_170_cov_1.842105_g77350_i0 PRJNA399711 77492 170 1.842105 3.1315785 Bacillati 1783272 Bacteria Bacteria 45.8 9.39e-4   NR MBQ7040969.1 2026720 g77350 i0 70.8 1.23529411764706 24 7 42.4 0 3 74 196 219 MBQ7040969.1 tRNA (guanosine(37)-N1)-methyltransferase TrmD [Candidatus Saccharibacteria bacterium] diamond 210 45.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
33071220 33071220 PRJNA399711_S_NODE_33301_length_230_cov_3.248705_g33159_i0 PRJNA399711 33301 230 3.248705 7.4720215 Patescibacteria group bacterium 2052139 Bacteria Bacteria 139 1.4099999999999998e-37   NR HEX8923619.1 2052139 g33159 i0 89.2 0.965217391304348 74 8 96.5 0 7 228 31 104 HEX8923619.1 Fe-S cluster assembly protein SufB [Patescibacteria group bacterium] diamond 222 139 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
33088416 33088416 PRJNA399711_S_NODE_37830_length_220_cov_3.147541_g37688_i0 PRJNA399711 37830 220 3.147541 6.9245902 Candidatus Levyibacteriota bacterium 2052151 Bacteria Bacteria 87.4 2.43e-18   NR MBP6913188.1 2052151 g37688 i0 55.7 0.954545454545455 70 31 95.5 0 211 2 92 161 MBP6913188.1 hypothetical protein [Candidatus Levyibacteriota bacterium] diamond 210 87.4 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levyibacteriota bacterium
33105508 33105508 PRJNA399711_S_NODE_40046_length_216_cov_1.541899_g39904_i0 PRJNA399711 40046 216 1.541899 3.33050184 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 63.2 6.1e-10   NR MCA9332930.1 2026720 g39904 i0 38 1.94444444444444 71 43 97.2 1 210 1 4 74 MCA9332930.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 420 63.2 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
33105772 33105772 PRJNA399711_S_NODE_84398_length_165_cov_1.195312_g84256_i0 PRJNA399711 84398 165 1.195312 1.9722648 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 81.6 3.49e-17   NR MBB1566001.1 2026720 g84256 i0 70.4 2.92727272727273 54 16 98.2 0 4 165 52 105 MBB1566001.1 di-trans,poly-cis-decaprenylcistransferase [Candidatus Saccharibacteria bacterium] diamond 483 81.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
33122476 33122476 PRJNA399711_S_NODE_31607_length_234_cov_6.228426_g31465_i0 PRJNA399711 31607 234 6.228426 14.57451684 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 61.6 2.92e-9   NR MEJ0073515.1 2026720 g31465 i0 77.4 0.794871794871795 31 7 39.7 0 3 95 185 215 MEJ0073515.1 tRNA (guanosine(37)-N1)-methyltransferase TrmD [Candidatus Saccharibacteria bacterium] diamond 186 61.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
33122872 33122872 PRJNA399711_S_NODE_92375_length_159_cov_4.672131_g92233_i0 PRJNA399711 92375 159 4.672131 7.42868829 Candidatus Sumerlaeaceae bacterium 2315423 Bacteria Bacteria 58.9 2.26e-8   NR MCX7719065.1 2315423 g92233 i0 55.8 2.94339622641509 52 23 98.1 0 157 2 63 114 MCX7719065.1 ATP-dependent helicase [Candidatus Sumerlaeaceae bacterium] diamond 468 58.9 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae   Candidatus Sumerlaeaceae bacterium
33156596 33156596 PRJNA399711_S_NODE_46824_length_204_cov_1.826347_g46682_i0 PRJNA399711 46824 204 1.826347 3.72574788 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 53.1 4.61e-6   NR NBP55078.1 2802965 g46682 i0 39.4 0.970588235294118 66 36 97.1 1 202 5 385 446 NBP55078.1 hypothetical protein [Candidatus Elulimicrobium humile] diamond 198 53.1 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile
33156774 33156774 PRJNA399711_S_NODE_73960_length_173_cov_1.036765_g73818_i0 PRJNA399711 73960 173 1.036765 1.79360345 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 122 1.78e-30   NR HEY6363595.1 2838779 g73818 i0 100 0.988439306358382 57 0 98.8 0 172 2 175 231 HEY6363595.1 DNA polymerase I [Candidatus Binatia bacterium] diamond 171 122 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
33173638 33173638 PRJNA399711_S_NODE_15592_length_300_cov_2.923954_g15450_i0 PRJNA399711 15592 300 2.923954 8.771862 Patescibacteria group bacterium 2052139 Bacteria Bacteria 52 3.8e-6   NR MCX8008351.1 2052139 g15450 i0 44.4 0.81 81 44 81 1 254 12 13 92 MCX8008351.1 hypothetical protein [Patescibacteria group bacterium] diamond 243 52 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;