contig_metadata
5 rows where bioproject = "PRJNA399133" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5516956 | 5516956 | PRJNA399133_P_NODE_2265_length_330_cov_3.447458_g2177_i0 | PRJNA399133 | 2265 | 330 | 3.447458 | 11.3766114 | Desulfarculaceae bacterium | 2528248 | Bacteria | Bacteria | 52.8 | 0.031 | NTclustered | gi|2621780225|emb|OY776512.1| | 2528248 | g2177 | i0 | 100 | 0.0848484848484849 | 28 | 0 | 8 | 0 | 127 | 154 | 5698994 | 5698967 | MAG: Desulfarculaceae bacterium isolate e2237022-3439-453f-a1e0-3d3180ebaa11 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfarculia | Desulfarculales | Desulfarculaceae | Desulfarculaceae bacterium | |||
| 22089753 | 22089753 | PRJNA399133_P_NODE_5518_length_225_cov_3.194737_g5430_i0 | PRJNA399133 | 5518 | 225 | 3.194737 | 7.18815825 | Geomonas paludis | 2740185 | Bacteria | Bacteria | 209 | 1.12e-49 | NTclustered | gi|2233265061|gb|CP096574.1| | 2740185 | g5430 | i0 | 86 | 38.2177777777778 | 200 | 23 | 88 | 5 | 2 | 199 | 3098798 | 3098994 | Geomonas paludis strain RG22 chromosome, complete genome | blastn | 8599 | 209 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geomonas | Geomonas paludis | ||
| 29934343 | 29934343 | PRJNA399133_P_NODE_5131_length_229_cov_1.881443_g5043_i0 | PRJNA399133 | 5131 | 229 | 1.881443 | 4.30850447 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 48.9 | 2.15e-4 | NR | OGR15812.1 | 1797913 | g5043 | i0 | 43.4 | 1.96506550218341 | 76 | 41 | 99.6 | 1 | 2 | 229 | 917 | 990 | OGR15812.1 MAG: hypothetical protein A2X81_08225 [Desulfobacterales bacterium GWB2_56_26] | diamond | 450 | 48.9 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacterales bacterium GWB2_56_26 | ||||
| 30991780 | 30991780 | PRJNA399133_P_NODE_5214_length_229_cov_1.793814_g5126_i0 | PRJNA399133 | 5214 | 229 | 1.793814 | 4.10783406 | Desulfosalsimonas propionicica | 332175 | Bacteria | Bacteria | 53.9 | 3.47e-6 | NR | WP_220128375.1 | 332175 | g5126 | i0 | 100 | 0.62882096069869 | 24 | 0 | 31.4 | 0 | 74 | 3 | 718 | 741 | WP_220128375.1 molybdopterin-dependent oxidoreductase [Desulfosalsimonas propionicica] | diamond | 144 | 53.9 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfosalsimonadaceae | Desulfosalsimonas | Desulfosalsimonas propionicica | ||
| 32635886 | 32635886 | PRJNA399133_P_NODE_340_length_917_cov_2.975057_g287_i0 | PRJNA399133 | 340 | 917 | 2.975057 | 27.28127269 | Desulfobacterales bacterium | 2044940 | Bacteria | Bacteria | 181 | 9.49e-53 | NR | MDH3876401.1 | 2044940 | g287 | i0 | 57.8 | 0.588876772082879 | 180 | 70 | 58.9 | 3 | 723 | 184 | 11 | 184 | MDH3876401.1 ERF family protein [Desulfobacterales bacterium] | diamond | 540 | 181 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacterales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;