RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA399133" and tax_kingdom = "Promethearchaeati"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Promethearchaeati · 3 ✖

bioproject 1

  • PRJNA399133 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27913196 27913196 PRJNA399133_P_NODE_11945_length_153_cov_1.694915_g11857_i0 PRJNA399133 11945 153 1.694915 2.59321995 root 1 Root_unresolved Root_unresolved 102 1.1199999999999999e-23   NR TFH03787.1 2053491 g11857 i0 100 1.96078431372549 50 0 98 0 2 151 417 466 TFH03787.1 MAG: hypothetical protein E4H14_16070, partial [Candidatus Thorarchaeota archaeon] diamond 300 102 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon
28418784 28418784 PRJNA399133_P_NODE_12086_length_152_cov_1.965812_g11998_i0 PRJNA399133 12086 152 1.965812 2.98803424 root 1 Root_unresolved Root_unresolved 87.4 9.46e-20   NR TFH04701.1 2053491 g11998 i0 76 1.97368421052632 50 12 98.7 0 152 3 90 139 TFH04701.1 MAG: hypothetical protein E4H14_14185 [Candidatus Thorarchaeota archaeon] diamond 300 87.4 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon
31497673 31497673 PRJNA399133_P_NODE_1896_length_365_cov_1.575758_g1809_i0 PRJNA399133 1896 365 1.575758 5.7515167 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 212 6.07e-65   NR TFH04702.1 2053491 g1809 i0 82.6 2.98356164383562 121 21 99.5 0 2 364 18 138 TFH04702.1 MAG: hypothetical protein E4H14_14190, partial [Candidatus Thorarchaeota archaeon] diamond 1089 212 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;