RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA399133", tax_clade = "FCB group" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA399133 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26632252 26632252 PRJNA399133_P_NODE_7881_length_186_cov_2.874172_g7793_i0 PRJNA399133 7881 186 2.874172 5.34595992 Balneola sp. 2024824 Bacteria Bacteria 65.1 1.36e-10   NR HAW81698.1 2024824 g7793 i0 56.4 1.90322580645161 55 23 87.1 1 175 14 19 73 HAW81698.1 hypothetical protein [Balneola sp.] diamond 354 65.1 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola sp.
29380625 29380625 PRJNA399133_P_NODE_6649_length_203_cov_3.577381_g6561_i0 PRJNA399133 6649 203 3.577381 7.26208343 Balneola sp. 2024824 Bacteria Bacteria 42 0.0375   NR HAW80067.1 2024824 g6561 i0 44.4 0.665024630541872 45 20 66.5 3 62 196 1 40 HAW80067.1 hypothetical protein [Balneola sp.] diamond 135 42 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;