RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA397736" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA397736 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5515841 5515841 PRJNA397736_S_NODE_145_length_754_cov_23.711724_g130_i0 PRJNA397736 145 754 23.711724 178.78639896 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 54.7 0.021   NTclustered gi|1191051559|ref|XM_021047964.1| 2652724 g130 i0 100 0.0384615384615385 29 0 4 0 500 528 3818 3846 PREDICTED: Exaiptasia diaphana monocarboxylate transporter 10 (LOC110242031), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana
28370201 28370201 PRJNA397736_S_NODE_106_length_880_cov_16.274971_g95_i0 PRJNA397736 106 880 16.274971 143.2197448 Desmophyllum pertusum 174260 Cnidaria other_Eukaryota 79.3 4.83e-15   NR KAJ7386308.1 174260 g95 i0 56.7 2.95909090909091 60 25 20.1 1 151 327 4 63 KAJ7386308.1 PI-actitoxin-Aeq3b, partial [Desmophyllum pertusum] diamond 2604 79.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Caryophylliidae Desmophyllum Desmophyllum pertusum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;