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contig_metadata

16 rows where bioproject = "PRJNA397736" and tax_phylum = "Ascomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 16 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA397736 · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3630698 3630698 PRJNA397736_S_NODE_2443_length_171_cov_13.359155_g2407_i0 PRJNA397736 2443 171 13.359155 22.84415505 Physciaceae 50934 Fungi Fungi 316 4.6e-82   NTclustered gi|1895681276|gb|MT913588.1| 116805 g2407 i0 100 99.9590643274854 171 0 100 0 1 171 1242 1072 Phaeophyscia orbicularis isolate DM1079 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 17093 316 1 Eukaryota Opisthokonta Fungi Ascomycota Lecanoromycetes Caliciales Physciaceae Phaeophyscia Phaeophyscia orbicularis
6182979 6182979 PRJNA397736_S_NODE_1065_length_277_cov_26.233871_g1029_i0 PRJNA397736 1065 277 26.233871 72.66782267 Pezizales 5185 Fungi Fungi 464 2.7599999999999994e-126   NTclustered gi|158934254|emb|AM748736.1| 39416 g1029 i0 98.127 96.3898916967509 267 4 96 1 1 266 669 935 Tuber melanosporum partial 18S rRNA gene, isolate M106 blastn 26700 464 1 Eukaryota Opisthokonta Fungi Ascomycota Pezizomycetes Pezizales Tuberaceae Tuber Tuber melanosporum
7457831 7457831 PRJNA397736_S_NODE_1066_length_277_cov_23.362903_g1030_i0 PRJNA397736 1066 277 23.362903 64.71524131 Ascomycota 4890 Fungi Fungi 425 1.3e-114   NTclustered gi|2804617|gb|U86693.1|STU86693 57085 g1030 i0 95.506 96.3754512635379 267 11 96 1 1 266 750 1016 Sphinctrina turbinata 18S SSU ribosomal RNA, partial sequence blastn 26696 425 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Mycocaliciales Sphinctrinaceae Sphinctrina Sphinctrina turbinata
7457835 7457835 PRJNA397736_S_NODE_246_length_606_cov_17.464471_g214_i1 PRJNA397736 246 606 17.464471 105.83469426 Physciaceae 50934 Fungi Fungi 1011 0   NTclustered gi|1895681276|gb|MT913588.1| 116805 g214 i1 96.865 99.1518151815181 606 15 99 3 1 604 484 1087 Phaeophyscia orbicularis isolate DM1079 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 60086 1011 1 Eukaryota Opisthokonta Fungi Ascomycota Lecanoromycetes Caliciales Physciaceae Phaeophyscia Phaeophyscia orbicularis
8732697 8732697 PRJNA397736_S_NODE_87_length_944_cov_158.506011_g78_i0 PRJNA397736 87 944 158.506011 1496.29674384 root 1 Root_unresolved Root_unresolved 62.1 1.59e-4   NTclustered gi|1759050525|gb|CP039672.1| 13684 g78 i0 97.222 0.578389830508475 36 1 4 0 1 36 1538442 1538407 Parastagonospora nodorum strain Sn79 chromosome 8 blastn 546 62.1 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Phaeosphaeriaceae Parastagonospora Parastagonospora nodorum
10616032 10616032 PRJNA397736_S_NODE_1569_length_221_cov_22.963542_g1533_i0 PRJNA397736 1569 221 22.963542 50.74942782 Physconia distorta 114786 Fungi Fungi 387 4.729999999999998e-103   NTclustered gi|54873387|gb|AY773930.1| 114786 g1533 i0 98.19 101.565610859729 221 4 100 0 1 221 502 722 Physconia distorta 26S large subunit ribosomal RNA gene, partial sequence blastn 22446 387 1 Eukaryota Opisthokonta Fungi Ascomycota Lecanoromycetes Caliciales Physciaceae Physconia Physconia distorta
11890936 11890936 PRJNA397736_S_NODE_1110_length_270_cov_11.145228_g1074_i0 PRJNA397736 1110 270 11.145228 30.0921156 Polyblastidium squamulosum 2294038 Fungi Fungi 357 4.6799999999999997e-94   NTclustered gi|1476663660|gb|MG257770.1| 2294038 g1074 i0 92.4 96.737037037037 250 19 93 0 21 270 8653 8404 Heterodermia squamulosa voucher 48701 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 26S ribosomal RNA gene, complete sequence blastn 26119 357 1 Eukaryota Opisthokonta Fungi Ascomycota Lecanoromycetes Caliciales Physciaceae Polyblastidium Polyblastidium squamulosum
11890943 11890943 PRJNA397736_S_NODE_630_length_366_cov_13.311573_g594_i0 PRJNA397736 630 366 13.311573 48.72035718 Phaeophyscia orbicularis 116805 Fungi Fungi 632 9.759999999999998e-177   NTclustered gi|1895681276|gb|MT913588.1| 116805 g594 i0 97.814 100 366 8 100 0 1 366 2525 2160 Phaeophyscia orbicularis isolate DM1079 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 36600 632 1 Eukaryota Opisthokonta Fungi Ascomycota Lecanoromycetes Caliciales Physciaceae Phaeophyscia Phaeophyscia orbicularis
16382344 16382344 PRJNA397736_S_NODE_393_length_470_cov_15.460317_g214_i3 PRJNA397736 393 470 15.460317 72.6634899 Fungi 4751 Fungi Fungi 737 0   NTclustered gi|1473264940|gb|MH877884.1| 29917 g214 i3 95.106 100.059574468085 470 20 99 3 2 470 487 20 Cladosporium cladosporioides culture CBS:126200 strain CBS 126200 large subunit ribosomal RNA gene, partial sequence blastn 47028 743 0.991924629878869 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
17657494 17657494 PRJNA397736_S_NODE_2694_length_161_cov_10.356061_g2658_i0 PRJNA397736 2694 161 10.356061 16.67325821 Caliciales 1302181 Fungi Fungi 298 1.56e-76   NTclustered gi|49781160|gb|AY648096.1| 50936 g2658 i0 100 100 161 0 100 0 1 161 1033 1193 Physcia aipolia strain P1 18S ribosomal RNA gene, partial sequence blastn 16100 298 1 Eukaryota Opisthokonta Fungi Ascomycota Lecanoromycetes Caliciales Physciaceae Physcia Physcia aipolia
18931396 18931396 PRJNA397736_S_NODE_1255_length_249_cov_16.100000_g1219_i0 PRJNA397736 1255 249 16.1 40.089 Physcia 50935 Fungi Fungi 424 4.15e-114   NTclustered gi|49781175|gb|AY648100.1| 116813 g1219 i0 97.222 101.200803212851 252 4 100 2 1 249 3 254 Physcia caesia strain P8 18S ribosomal RNA gene, partial sequence blastn 25199 424 1 Eukaryota Opisthokonta Fungi Ascomycota Lecanoromycetes Caliciales Physciaceae Physcia Physcia caesia
18931398 18931398 PRJNA397736_S_NODE_1715_length_210_cov_33.110497_g1679_i0 PRJNA397736 1715 210 33.110497 69.5320437 Eukaryota 2759 Fungi Fungi 372 1.25e-98   NTclustered gi|38570335|gb|L76614.1|CCURGOAA 5570 g1679 i0 98.571 100 210 3 100 0 1 210 1374 1583 Cenococcum geophilum strain 349 small subunit ribosomal RNA gene, complete sequence blastn 21000 372 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Gloniales Gloniaceae Cenococcum Cenococcum geophilum
22756867 22756867 PRJNA397736_S_NODE_2858_length_157_cov_2.351562_g2822_i0 PRJNA397736 2858 157 2.351562 3.69195234 Fungi 4751 Fungi Fungi 291 2.52e-74   NTclustered gi|908900564|gb|KT207688.1| 5599 g2822 i0 100 100 157 0 100 0 1 157 736 580 Alternaria alternata strain KUC21222 28S ribosomal RNA gene, partial sequence blastn 15700 291 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria alternata
23364207 23364207 PRJNA397736_S_NODE_579_length_381_cov_9.397727_g543_i0 PRJNA397736 579 381 9.397727 35.80533987 Taphrina amentorum 177208 Fungi Fungi 667 0   NTclustered gi|1895681277|gb|MT913589.1| 177208 g543 i0 98.163 99.9370078740157 381 7 100 0 1 381 1569 1949 Taphrina amentorum isolate DM1088 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 38076 667 1 Eukaryota Opisthokonta Fungi Ascomycota Taphrinomycetes Taphrinales Taphrinaceae Taphrina Taphrina amentorum
24638529 24638529 PRJNA397736_S_NODE_1240_length_252_cov_14.470852_g1204_i0 PRJNA397736 1240 252 14.470852 36.46654704 Phaeophyscia orbicularis 116805 Fungi Fungi 466 6.89e-127   NTclustered gi|1895681276|gb|MT913588.1| 116805 g1204 i0 100 100.047619047619 252 0 100 0 1 252 3025 2774 Phaeophyscia orbicularis isolate DM1079 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 25212 466 1 Eukaryota Opisthokonta Fungi Ascomycota Lecanoromycetes Caliciales Physciaceae Phaeophyscia Phaeophyscia orbicularis
28117521 28117521 PRJNA397736_S_NODE_1265_length_249_cov_5.318182_g1229_i0 PRJNA397736 1265 249 5.318182 13.24227318 Pyrenophora seminiperda CCB 91370 Fungi Fungi 56.6 3.16e-7   NR RMZ72191.1 1302712 g1229 i0 65.9 1.89156626506024 41 14 49.4 0 249 127 128 168 RMZ72191.1 40s ribosomal s27 [Pyrenophora seminiperda CCB06] diamond 471 56.6 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Pyrenophora Pyrenophora seminiperda

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;