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contig_metadata

29 rows where bioproject = "PRJNA397736" and tax_kingdom = "Fungi"

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tax_phylum 3

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Fungi · 29 ✖

tax_clade 1

bioproject 1

  • PRJNA397736 · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2355332 2355332 PRJNA397736_S_NODE_1982_length_192_cov_31.049080_g1946_i0 PRJNA397736 1982 192 31.04908 59.6142336 Basidiomycota 5204 Fungi Fungi 331 1.9e-86   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g1946 i0 99.451 112.703125 182 1 95 0 1 182 2830 2649 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 21639 331 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
2962889 2962889 PRJNA397736_S_NODE_203_length_657_cov_17.073248_g185_i0 PRJNA397736 203 657 17.073248 112.17123936 Kwoniella shivajii 564305 Fungi Fungi 60.2 3.91e-4   NTclustered gi|2670911400|ref|XM_062933773.1| 564305 g185 i0 100 0.184170471841705 32 0 5 0 626 657 301 270 Kwoniella shivajii uncharacterized protein (IL334_002026), partial mRNA blastn 121 60.2 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Kwoniella Kwoniella shivajii
3630698 3630698 PRJNA397736_S_NODE_2443_length_171_cov_13.359155_g2407_i0 PRJNA397736 2443 171 13.359155 22.84415505 Physciaceae 50934 Fungi Fungi 316 4.6e-82   NTclustered gi|1895681276|gb|MT913588.1| 116805 g2407 i0 100 99.9590643274854 171 0 100 0 1 171 1242 1072 Phaeophyscia orbicularis isolate DM1079 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 17093 316 1 Eukaryota Opisthokonta Fungi Ascomycota Lecanoromycetes Caliciales Physciaceae Phaeophyscia Phaeophyscia orbicularis
6182979 6182979 PRJNA397736_S_NODE_1065_length_277_cov_26.233871_g1029_i0 PRJNA397736 1065 277 26.233871 72.66782267 Pezizales 5185 Fungi Fungi 464 2.7599999999999994e-126   NTclustered gi|158934254|emb|AM748736.1| 39416 g1029 i0 98.127 96.3898916967509 267 4 96 1 1 266 669 935 Tuber melanosporum partial 18S rRNA gene, isolate M106 blastn 26700 464 1 Eukaryota Opisthokonta Fungi Ascomycota Pezizomycetes Pezizales Tuberaceae Tuber Tuber melanosporum
7457831 7457831 PRJNA397736_S_NODE_1066_length_277_cov_23.362903_g1030_i0 PRJNA397736 1066 277 23.362903 64.71524131 Ascomycota 4890 Fungi Fungi 425 1.3e-114   NTclustered gi|2804617|gb|U86693.1|STU86693 57085 g1030 i0 95.506 96.3754512635379 267 11 96 1 1 266 750 1016 Sphinctrina turbinata 18S SSU ribosomal RNA, partial sequence blastn 26696 425 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Mycocaliciales Sphinctrinaceae Sphinctrina Sphinctrina turbinata
7457835 7457835 PRJNA397736_S_NODE_246_length_606_cov_17.464471_g214_i1 PRJNA397736 246 606 17.464471 105.83469426 Physciaceae 50934 Fungi Fungi 1011 0   NTclustered gi|1895681276|gb|MT913588.1| 116805 g214 i1 96.865 99.1518151815181 606 15 99 3 1 604 484 1087 Phaeophyscia orbicularis isolate DM1079 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 60086 1011 1 Eukaryota Opisthokonta Fungi Ascomycota Lecanoromycetes Caliciales Physciaceae Phaeophyscia Phaeophyscia orbicularis
8732697 8732697 PRJNA397736_S_NODE_87_length_944_cov_158.506011_g78_i0 PRJNA397736 87 944 158.506011 1496.29674384 root 1 Root_unresolved Root_unresolved 62.1 1.59e-4   NTclustered gi|1759050525|gb|CP039672.1| 13684 g78 i0 97.222 0.578389830508475 36 1 4 0 1 36 1538442 1538407 Parastagonospora nodorum strain Sn79 chromosome 8 blastn 546 62.1 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Phaeosphaeriaceae Parastagonospora Parastagonospora nodorum
8732698 8732698 PRJNA397736_S_NODE_927_length_296_cov_24.363296_g891_i0 PRJNA397736 927 296 24.363296 72.11535616 Malassezia 55193 Fungi Fungi 521 1.7399999999999995e-143   NTclustered gi|1042812810|gb|KT351778.1| 76775 g891 i0 98.639 99.2635135135135 294 4 99 0 3 296 312 19 Malassezia restricta isolate contig100_19323 26S ribosomal RNA gene, partial sequence blastn 29382 521 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
10616032 10616032 PRJNA397736_S_NODE_1569_length_221_cov_22.963542_g1533_i0 PRJNA397736 1569 221 22.963542 50.74942782 Physconia distorta 114786 Fungi Fungi 387 4.729999999999998e-103   NTclustered gi|54873387|gb|AY773930.1| 114786 g1533 i0 98.19 101.565610859729 221 4 100 0 1 221 502 722 Physconia distorta 26S large subunit ribosomal RNA gene, partial sequence blastn 22446 387 1 Eukaryota Opisthokonta Fungi Ascomycota Lecanoromycetes Caliciales Physciaceae Physconia Physconia distorta
11890936 11890936 PRJNA397736_S_NODE_1110_length_270_cov_11.145228_g1074_i0 PRJNA397736 1110 270 11.145228 30.0921156 Polyblastidium squamulosum 2294038 Fungi Fungi 357 4.6799999999999997e-94   NTclustered gi|1476663660|gb|MG257770.1| 2294038 g1074 i0 92.4 96.737037037037 250 19 93 0 21 270 8653 8404 Heterodermia squamulosa voucher 48701 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 26S ribosomal RNA gene, complete sequence blastn 26119 357 1 Eukaryota Opisthokonta Fungi Ascomycota Lecanoromycetes Caliciales Physciaceae Polyblastidium Polyblastidium squamulosum
11890943 11890943 PRJNA397736_S_NODE_630_length_366_cov_13.311573_g594_i0 PRJNA397736 630 366 13.311573 48.72035718 Phaeophyscia orbicularis 116805 Fungi Fungi 632 9.759999999999998e-177   NTclustered gi|1895681276|gb|MT913588.1| 116805 g594 i0 97.814 100 366 8 100 0 1 366 2525 2160 Phaeophyscia orbicularis isolate DM1079 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 36600 632 1 Eukaryota Opisthokonta Fungi Ascomycota Lecanoromycetes Caliciales Physciaceae Phaeophyscia Phaeophyscia orbicularis
15107650 15107650 PRJNA397736_S_NODE_2152_length_184_cov_10.825806_g2116_i0 PRJNA397736 2152 184 10.825806 19.91948304 Eukaryota 2759 Fungi Fungi 340 2.99e-89   NTclustered gi|2558627581|gb|OR405830.1| 76775 g2116 i0 100 102 184 0 100 0 1 184 320 503 Malassezia restricta strain GSVCC20Z3-2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 18768 340 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
15714817 15714817 PRJNA397736_S_NODE_1653_length_215_cov_9.639785_g1617_i0 PRJNA397736 1653 215 9.639785 20.72553775 uncultured fungus 175245 Fungi Fungi 387 4.57e-103   NTclustered gi|371942857|gb|JQ007335.1| 175245 g1617 i0 99.07 100 215 2 100 0 1 215 284 70 Uncultured fungus isolate DGGE gel band 19 18S ribosomal RNA gene, partial sequence blastn 21500 387 1 Eukaryota Opisthokonta Fungi           uncultured fungus
15714819 15714819 PRJNA397736_S_NODE_733_length_340_cov_14.421222_g697_i0 PRJNA397736 733 340 14.421222 49.0321548 Malassezia restricta 76775 Fungi Fungi 590 5.499999999999999e-164   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g697 i0 97.947 88.3735294117647 341 6 100 1 1 340 3315 2975 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 30047 590 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
16382344 16382344 PRJNA397736_S_NODE_393_length_470_cov_15.460317_g214_i3 PRJNA397736 393 470 15.460317 72.6634899 Fungi 4751 Fungi Fungi 737 0   NTclustered gi|1473264940|gb|MH877884.1| 29917 g214 i3 95.106 100.059574468085 470 20 99 3 2 470 487 20 Cladosporium cladosporioides culture CBS:126200 strain CBS 126200 large subunit ribosomal RNA gene, partial sequence blastn 47028 743 0.991924629878869 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
17657492 17657492 PRJNA397736_S_NODE_1794_length_205_cov_16.886364_g1758_i0 PRJNA397736 1794 205 16.886364 34.6170462 Malassezia 55193 Fungi Fungi 374 3.3599999999999997e-99   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g1758 i0 99.512 103.843902439024 205 1 100 0 1 205 2625 2421 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 21288 374 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
17657494 17657494 PRJNA397736_S_NODE_2694_length_161_cov_10.356061_g2658_i0 PRJNA397736 2694 161 10.356061 16.67325821 Caliciales 1302181 Fungi Fungi 298 1.56e-76   NTclustered gi|49781160|gb|AY648096.1| 50936 g2658 i0 100 100 161 0 100 0 1 161 1033 1193 Physcia aipolia strain P1 18S ribosomal RNA gene, partial sequence blastn 16100 298 1 Eukaryota Opisthokonta Fungi Ascomycota Lecanoromycetes Caliciales Physciaceae Physcia Physcia aipolia
18931396 18931396 PRJNA397736_S_NODE_1255_length_249_cov_16.100000_g1219_i0 PRJNA397736 1255 249 16.1 40.089 Physcia 50935 Fungi Fungi 424 4.15e-114   NTclustered gi|49781175|gb|AY648100.1| 116813 g1219 i0 97.222 101.200803212851 252 4 100 2 1 249 3 254 Physcia caesia strain P8 18S ribosomal RNA gene, partial sequence blastn 25199 424 1 Eukaryota Opisthokonta Fungi Ascomycota Lecanoromycetes Caliciales Physciaceae Physcia Physcia caesia
18931398 18931398 PRJNA397736_S_NODE_1715_length_210_cov_33.110497_g1679_i0 PRJNA397736 1715 210 33.110497 69.5320437 Eukaryota 2759 Fungi Fungi 372 1.25e-98   NTclustered gi|38570335|gb|L76614.1|CCURGOAA 5570 g1679 i0 98.571 100 210 3 100 0 1 210 1374 1583 Cenococcum geophilum strain 349 small subunit ribosomal RNA gene, complete sequence blastn 21000 372 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Gloniales Gloniaceae Cenococcum Cenococcum geophilum
22088651 22088651 PRJNA397736_S_NODE_1078_length_275_cov_13.280488_g1042_i0 PRJNA397736 1078 275 13.280488 36.521342 uncultured fungus 175245 Fungi Fungi 507 4.49e-139   NTclustered gi|507143256|gb|KC674849.1| 175245 g1042 i0 100 99.6363636363636 274 0 99 0 2 275 363 90 Uncultured fungus clone nco89e02c1 18S ribosomal RNA gene, partial sequence blastn 27400 507 1 Eukaryota Opisthokonta Fungi           uncultured fungus
22756866 22756866 PRJNA397736_S_NODE_2558_length_165_cov_19.058824_g2522_i0 PRJNA397736 2558 165 19.058824 31.4470596 Opisthokonta 33154 Fungi Fungi 300 4.46e-77   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g2522 i0 99.394 99.5757575757576 165 1 100 0 1 165 843 679 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 16430 300 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
22756867 22756867 PRJNA397736_S_NODE_2858_length_157_cov_2.351562_g2822_i0 PRJNA397736 2858 157 2.351562 3.69195234 Fungi 4751 Fungi Fungi 291 2.52e-74   NTclustered gi|908900564|gb|KT207688.1| 5599 g2822 i0 100 100 157 0 100 0 1 157 736 580 Alternaria alternata strain KUC21222 28S ribosomal RNA gene, partial sequence blastn 15700 291 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria alternata
23364206 23364206 PRJNA397736_S_NODE_1739_length_208_cov_23.201117_g1703_i0 PRJNA397736 1739 208 23.201117 48.25832336 uncultured fungus 175245 Fungi Fungi 363 7.409999999999998e-96   NTclustered gi|253721508|gb|GQ253358.1| 175245 g1703 i0 98.086 100.038461538462 209 3 100 1 1 208 136 344 Uncultured fungus clone W918 18S ribosomal RNA gene, partial sequence blastn 20808 363 1 Eukaryota Opisthokonta Fungi           uncultured fungus
23364207 23364207 PRJNA397736_S_NODE_579_length_381_cov_9.397727_g543_i0 PRJNA397736 579 381 9.397727 35.80533987 Taphrina amentorum 177208 Fungi Fungi 667 0   NTclustered gi|1895681277|gb|MT913589.1| 177208 g543 i0 98.163 99.9370078740157 381 7 100 0 1 381 1569 1949 Taphrina amentorum isolate DM1088 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 38076 667 1 Eukaryota Opisthokonta Fungi Ascomycota Taphrinomycetes Taphrinales Taphrinaceae Taphrina Taphrina amentorum
24031669 24031669 PRJNA397736_S_NODE_2239_length_180_cov_4.880795_g2203_i0 PRJNA397736 2239 180 4.880795 8.785431 Eukaryota 2759 Fungi Fungi 327 2.2699999999999996e-85   NTclustered gi|157923938|gb|EU174139.1| 175245 g2203 i0 99.444 100 180 1 100 0 1 180 205 26 Uncultured fungus clone G914P31RN18.T0 18S ribosomal RNA gene, partial sequence blastn 18000 327 1 Eukaryota Opisthokonta Fungi           uncultured fungus
24638529 24638529 PRJNA397736_S_NODE_1240_length_252_cov_14.470852_g1204_i0 PRJNA397736 1240 252 14.470852 36.46654704 Phaeophyscia orbicularis 116805 Fungi Fungi 466 6.89e-127   NTclustered gi|1895681276|gb|MT913588.1| 116805 g1204 i0 100 100.047619047619 252 0 100 0 1 252 3025 2774 Phaeophyscia orbicularis isolate DM1079 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 25212 466 1 Eukaryota Opisthokonta Fungi Ascomycota Lecanoromycetes Caliciales Physciaceae Phaeophyscia Phaeophyscia orbicularis
24638533 24638533 PRJNA397736_S_NODE_380_length_481_cov_15.851770_g347_i0 PRJNA397736 380 481 15.85177 76.2470137 Malassezia restricta 76775 Fungi Fungi 887 0   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g347 i0 100 106.284823284823 480 0 99 0 2 481 1945 1466 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 51123 887 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
28117521 28117521 PRJNA397736_S_NODE_1265_length_249_cov_5.318182_g1229_i0 PRJNA397736 1265 249 5.318182 13.24227318 Pyrenophora seminiperda CCB 91370 Fungi Fungi 56.6 3.16e-7   NR RMZ72191.1 1302712 g1229 i0 65.9 1.89156626506024 41 14 49.4 0 249 127 128 168 RMZ72191.1 40s ribosomal s27 [Pyrenophora seminiperda CCB06] diamond 471 56.6 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Pyrenophora Pyrenophora seminiperda
32778547 32778547 PRJNA397736_S_NODE_940_length_295_cov_6.669173_g904_i0 PRJNA397736 940 295 6.669173 19.67406035 Eukaryota 2759 Fungi Fungi 44.7 0.0142   NR KAJ1948661.1 4868 g904 i0 32.9 2.36949152542373 82 45 83.4 1 286 41 399 470 KAJ1948661.1 glycylpeptide N-tetradecanoyltransferase [Linderina macrospora] diamond 699 45.1 0.991130820399113 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina macrospora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;