RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA397733" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA397733 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6789873 6789873 PRJNA397733_S_NODE_5586_length_256_cov_3.198238_g5498_i0 PRJNA397733 5586 256 3.198238 8.18748928 Pocillopora verrucosa 203993 Cnidaria other_Eukaryota 52.8 0.023   NTclustered gi|2751572571|ref|XM_059097252.2| 203993 g5498 i0 100 0.109375 28 0 11 0 91 118 4012 4039 PREDICTED: Pocillopora verrucosa exportin-4 (LOC131780638), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora verrucosa
28797222 28797222 PRJNA397733_S_NODE_1367_length_562_cov_5.868668_g1291_i0 PRJNA397733 1367 562 5.868668 32.98191416 Metazoa 33208 Cnidaria other_Eukaryota 358 2.8399999999999996e-112   NR XP_065665842.1 6087 g1291 i0 98.4 416.268683274021 187 3 99.8 0 1 561 539 725 XP_065665842.1 splicing factor 3B subunit 1 isoform X3 [Hydra vulgaris] diamond 233943 361 0.991689750692521 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
29759346 29759346 PRJNA397733_S_NODE_12771_length_170_cov_3.978723_g12683_i0 PRJNA397733 12771 170 3.978723 6.7638291 Paramuricea clavata 317549 Cnidaria other_Eukaryota 67.4 2.39e-12   NR CAB3995342.1 317549 g12683 i0 78.9 0.670588235294118 38 8 67.1 0 169 56 111 148 CAB3995342.1 transposase [Paramuricea clavata] diamond 114 67.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Plexauridae Paramuricea Paramuricea clavata
30155035 30155035 PRJNA397733_S_NODE_6192_length_242_cov_4.276995_g6104_i0 PRJNA397733 6192 242 4.276995 10.3503279 Metazoa 33208 Cnidaria other_Eukaryota 157 3.14e-44   NR KAK2561358.1 6130 g6104 i0 98.8 79.1280991735537 80 1 99.2 0 242 3 267 346 KAK2561358.1 26S proteasome regulatory subunit 8 [Acropora cervicornis] diamond 19149 157 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora cervicornis
30850346 30850346 PRJNA397733_S_NODE_16154_length_153_cov_3.822581_g16066_i0 PRJNA397733 16154 153 3.822581 5.84854893 root 1 Root_unresolved Root_unresolved 109 1.43e-26   NR XP_031569504.1 6105 g16066 i0 98 358.980392156863 51 1 100 0 153 1 44 94 XP_031569504.1 spliceosome RNA helicase Ddx39b [Actinia tenebrosa] diamond 54924 110 0.990909090909091 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
31166065 31166065 PRJNA397733_S_NODE_13455_length_166_cov_3.240876_g13367_i0 PRJNA397733 13455 166 3.240876 5.37985416 root 1 Root_unresolved Root_unresolved 114 2.21e-29   NR XP_031569126.1 6105 g13367 i0 98.1 137.277108433735 54 1 97.6 0 164 3 122 175 XP_031569126.1 F-actin-capping protein subunit beta-like isoform X1 [Actinia tenebrosa] diamond 22788 115 0.991304347826087 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
31971903 31971903 PRJNA397733_S_NODE_10478_length_186_cov_3.929936_g10390_i0 PRJNA397733 10478 186 3.929936 7.30968096 Pocillopora damicornis 46731 Cnidaria other_Eukaryota 41.2 0.0177   NR RMX44967.1 46731 g10390 i0 38.6 0.919354838709677 57 35 91.9 0 173 3 2 58 RMX44967.1 hypothetical protein pdam_00018189 [Pocillopora damicornis] diamond 171 41.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;