RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA397733", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA397733 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32066789 32066789 PRJNA397733_S_NODE_13058_length_168_cov_14.762590_g12970_i0 PRJNA397733 13058 168 14.76259 24.8011512 Anaerolineales bacterium 2073117 Bacteria Bacteria 41.6 0.0334   NR HET9588558.1 2073117 g12970 i0 51.4 0.660714285714286 37 18 66.1 0 148 38 139 175 HET9588558.1 ABC-2 family transporter protein [Anaerolineales bacterium] diamond 111 41.6 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
32383295 32383295 PRJNA397733_S_NODE_7179_length_226_cov_2.289340_g7091_i0 PRJNA397733 7179 226 2.28934 5.1739084 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 42.7 0.0287   NR HEY2917091.1 2952938 g7091 i0 50 0.557522123893805 42 21 55.8 0 224 99 154 195 HEY2917091.1 nucleotide sugar dehydrogenase [Candidatus Limnocylindrales bacterium] diamond 126 42.7 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;