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contig_metadata

7 rows where bioproject = "PRJNA397733" and tax_clade = "FCB group"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • FCB group · 7 ✖

bioproject 1

  • PRJNA397733 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2962884 2962884 PRJNA397733_S_NODE_7583_length_219_cov_3.500000_g7495_i0 PRJNA397733 7583 219 3.5 7.665 Chryseobacterium sp. 1871047 Bacteria Bacteria 394 2.79e-105   NTclustered gi|1757093052|gb|CP044507.1| 1871047 g7495 i0 99.087 457.022831050228 219 2 100 0 1 219 454200 454418 Chryseobacterium sp. strain SNU WT7 chromosome, complete genome blastn 100088 394 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Chryseobacterium Chryseobacterium sp.
4907900 4907900 PRJNA397733_S_NODE_13464_length_166_cov_3.102190_g13376_i0 PRJNA397733 13464 166 3.10219 5.1496354 Cloacibacterium 501783 Bacteria Bacteria 307 2.69e-79   NTclustered gi|1527207946|gb|CP034157.1| 237258 g13376 i0 100 476.006024096386 166 0 100 0 1 166 131843 132008 Cloacibacterium normanense strain NRS-1 chromosome, complete genome blastn 79017 307 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Cloacibacterium Cloacibacterium normanense
8732680 8732680 PRJNA397733_S_NODE_11027_length_182_cov_2.764706_g10939_i0 PRJNA397733 11027 182 2.764706 5.03176492 Weeksellaceae 2762318 Bacteria Bacteria 226 8.619999999999999e-55   NTclustered gi|1678513594|gb|CP040694.1| 2583851 g10939 i0 89.888 400.225274725275 178 14 97 4 3 179 648065 648239 Elizabethkingia sp. JS20170427COW chromosome, complete genome blastn 72841 226 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Elizabethkingia Elizabethkingia sp. JS20170427COW
12558625 12558625 PRJNA397733_S_NODE_15990_length_154_cov_2.600000_g15902_i0 PRJNA397733 15990 154 2.6 4.004 Weeksellaceae 2762318 Bacteria Bacteria 263 5.36e-66   NTclustered gi|1519580736|gb|CP033930.1| 253 g15902 i0 97.403 441.012987012987 154 4 100 0 1 154 2943976 2944129 Chryseobacterium indologenes strain H5559 chromosome, complete genome blastn 67916 263 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Chryseobacterium Chryseobacterium indologenes
19537992 19537992 PRJNA397733_S_NODE_14476_length_161_cov_2.522727_g14388_i0 PRJNA397733 14476 161 2.522727 4.06159047 Porphyromonas sp. oral taxon 275 712435 Bacteria Bacteria 287 3.37e-73   NTclustered gi|2028834772|gb|CP072333.1| 712435 g14388 i0 98.758 408.875776397516 161 2 100 0 1 161 442971 443131 Porphyromonas sp. oral taxon 275 strain W7780 chromosome, complete genome blastn 65829 287 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas Porphyromonas sp. oral taxon 275
26790665 26790665 PRJNA397733_S_NODE_14041_length_163_cov_2.731343_g13953_i0 PRJNA397733 14041 163 2.731343 4.45208909 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 40.4 0.0228   NR MCZ7616069.1 2651163 g13953 i0 50 0.699386503067485 38 19 69.9 0 44 157 39 76 MCZ7616069.1 hypothetical protein [Ignavibacteriaceae bacterium] diamond 114 40.4 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
28338711 28338711 PRJNA397733_S_NODE_15366_length_157_cov_2.289062_g15278_i0 PRJNA397733 15366 157 2.289062 3.59382734 Polaribacter litorisediminis 1908341 Bacteria Bacteria 43.5 0.0045   NR WP_223439602.1 1908341 g15278 i0 39.1 0.878980891719745 46 28 87.9 0 152 15 120 165 WP_223439602.1 PAS domain-containing protein [Polaribacter litorisediminis] diamond 138 43.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Polaribacter Polaribacter litorisediminis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;