RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA397065" and tax_superkingdom = "Viruses"

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tax_kingdom 2

analysis 2

tax_superkingdom 1

  • Viruses · 6 ✖

bioproject 1

  • PRJNA397065 · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4239083 4239083 PRJNA397065_S_NODE_24_length_4644_cov_70.608234_g19_i0 PRJNA397065 24 4644 70.608234 3279.04638696 Totivirus ni 3432954 Viruses Viruses 8298 0   NTclustered gi|9627980|ref|NC_001641.1| 42478 g19 i0 99.346 3.94918173987941 4584 28 100 2 1 4583 33 4615 Saccharomyces cerevisiae virus L-BC (La), complete genome blastn 18340 8298 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus ni
14440891 14440891 PRJNA397065_S_NODE_14972_length_187_cov_14772.601266_g14722_i0 PRJNA397065 14972 187 14772.601266 27624.76436742 Caudoviricetes sp. 2832643 Viruses Viruses 69.4 1.59e-7   NTclustered gi|2056808531|tpg|BK057475.1| 2832643 g14722 i0 100 21.2032085561497 37 0 20 0 1 37 17 53 MAG TPA_asm: Caudoviricetes sp. isolate ctwEd7, partial genome blastn 3965 69.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
22088502 22088502 PRJNA397065_S_NODE_158_length_2522_cov_930.551544_g122_i0 PRJNA397065 158 2522 930.551544 23468.50993968 Narnavirus saccharominor 3431059 Viruses Viruses 4551 0   NTclustered gi|21557564|ref|NC_004051.1| 186772 g122 i0 99.441 4.89532117367169 2506 14 99 0 1 2506 9 2514 Saccharomyces 20S RNA narnavirus, complete genome blastn 12346 4551 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus saccharominor
24638490 24638490 PRJNA397065_S_NODE_6980_length_345_cov_7033.775316_g6730_i0 PRJNA397065 6980 345 7033.775316 24266.5248402 Caudoviricetes sp. 2832643 Viruses Viruses 69.4 3.24e-7   NTclustered gi|2056808531|tpg|BK057475.1| 2832643 g6730 i0 100 11.4927536231884 37 0 11 0 1 37 17 53 MAG TPA_asm: Caudoviricetes sp. isolate ctwEd7, partial genome blastn 3965 69.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
27391615 27391615 PRJNA397065_S_NODE_18363_length_160_cov_1.786260_g18113_i0 PRJNA397065 18363 160 1.78626 2.858016 Henan mito-like virus 24 2937099 Viruses Viruses 51.2 1.24e-5   NR UPW42100.1 2937099 g18113 i0 54.5 0.825 44 20 82.5 0 2 133 130 173 UPW42100.1 MAG: putative RNA dependent RNA polymerase [Henan mito-like virus 24] diamond 132 51.2 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Henan mito-like virus 24
27833390 27833390 PRJNA397065_S_NODE_19964_length_150_cov_1.545455_g19714_i0 PRJNA397065 19964 150 1.545455 2.3181825 Sunflower rust-associated mitovirus 1 2761498 Viruses Viruses 54.7 6.47e-7   NR QMW50423.1 2761498 g19714 i0 65 0.8 40 14 80 0 22 141 141 180 QMW50423.1 RNA-dependent RNA polymerase, partial [Sunflower rust-associated mitovirus 1] diamond 120 54.7 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Sunflower rust-associated mitovirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;