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contig_metadata

17 rows where bioproject = "PRJNA397065" and tax_phylum = "Euglenozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 17 ✖

tax_clade 1

bioproject 1

  • PRJNA397065 · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1079580 1079580 PRJNA397065_S_NODE_19761_length_151_cov_1.844262_g19511_i0 PRJNA397065 19761 151 1.844262 2.78483562 Trypanosoma 5690 Euglenozoa other_Eukaryota 279 5.19e-71   NTclustered gi|62175237|gb|AC159408.1| 5691 g19511 i0 100 17 151 0 100 0 1 151 103490 103340 Trypanosoma brucei chromosome 7 clone RPCI93-13M20, complete sequence blastn 2567 279 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei
2962736 2962736 PRJNA397065_S_NODE_14383_length_194_cov_1.703030_g14133_i0 PRJNA397065 14383 194 1.70303 3.3038782 Trypanosoma brucei 5691 Euglenozoa other_Eukaryota 230 7.21e-56   NTclustered gi|788025283|ref|XM_011781935.1| 679716 g14133 i0 100 2.51546391752577 124 0 64 0 71 194 513 390 Trypanosoma brucei gambiense DAL972 60S ribosomal protein L34, putative partial mRNA blastn 488 230 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei
4907466 4907466 PRJNA397065_S_NODE_16904_length_171_cov_1.640845_g16654_i0 PRJNA397065 16904 171 1.640845 2.80584495 Trypanosoma 5690 Euglenozoa other_Eukaryota 316 4.6e-82   NTclustered gi|62360037|gb|AC084046.13| 5691 g16654 i0 100 12.812865497076 171 0 100 0 1 171 4766 4936 Trypanosoma brucei chromosome 6 clone RPCI93-3D8, complete sequence blastn 2191 316 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei
4907553 4907553 PRJNA397065_S_NODE_19124_length_155_cov_1.476190_g18874_i0 PRJNA397065 19124 155 1.47619 2.2880945 Trypanosoma 5690 Euglenozoa other_Eukaryota 287 3.21e-73   NTclustered gi|2554932|gb|AF020695.1|AF020695 5691 g18874 i0 100 6 155 0 100 0 1 155 359 513 Trypanosoma brucei RNA binding protein (TBP34) mRNA, complete cds blastn 930 287 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei
7457216 7457216 PRJNA397065_S_NODE_13246_length_207_cov_2.028090_g12996_i0 PRJNA397065 13246 207 2.02809 4.1981463 Trypanosoma 5690 Euglenozoa other_Eukaryota 383 5.65e-102   NTclustered gi|2785785483|ref|XM_067224195.1| 5694 g12996 i0 100 5 207 0 100 0 1 207 291 497 Trypanosoma equiperdum 60S ribosomal protein L10a, putative (TEOVI_000087300), partial mRNA blastn 1035 383 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma equiperdum
8732310 8732310 PRJNA397065_S_NODE_18667_length_158_cov_1.821705_g18417_i0 PRJNA397065 18667 158 1.821705 2.8782939 Trypanosoma 5690 Euglenozoa other_Eukaryota 292 7.07e-75   NTclustered gi|71744361|ref|XM_798605.1| 185431 g18417 i0 100 3 158 0 100 0 1 158 193 350 Trypanosoma brucei brucei TREU927 ribosomal protein S7, putative (Tb09.160.2550), partial mRNA blastn 474 292 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei
10007526 10007526 PRJNA397065_S_NODE_16708_length_172_cov_3.419580_g16458_i0 PRJNA397065 16708 172 3.41958 5.8816776 Trypanosoma 5690 Euglenozoa other_Eukaryota 318 1.2899999999999999e-82   NTclustered gi|10512|emb|X16015.1| 5691 g16458 i0 100 36.8779069767442 172 0 100 0 1 172 354 525 T.brucei ProA DNA for procyclin blastn 6343 318 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei
13165700 13165700 PRJNA397065_S_NODE_10751_length_244_cov_2.883721_g10501_i0 PRJNA397065 10751 244 2.883721 7.03627924 Trypanosoma brucei 5691 Euglenozoa other_Eukaryota 446 8.639999999999999e-121   NTclustered gi|71755618|ref|XM_823631.1| 185431 g10501 i0 99.59 2.77049180327869 244 1 100 0 1 244 340 583 Trypanosoma brucei brucei TREU927 40S ribosomal protein S21, putative (Tb11.02.4350), partial mRNA blastn 676 446 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei
13165736 13165736 PRJNA397065_S_NODE_14871_length_189_cov_1.468750_g14621_i0 PRJNA397065 14871 189 1.46875 2.7759375 Trypanosoma brucei 5691 Euglenozoa other_Eukaryota 346 6.64e-91   NTclustered gi|788013489|ref|XM_011778102.1| 679716 g14621 i0 100 2.96825396825397 187 0 99 0 2 188 550 364 Trypanosoma brucei gambiense DAL972 ribosomal protein S7, putative partial mRNA blastn 561 346 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei
14441020 14441020 PRJNA397065_S_NODE_9152_length_278_cov_1.795181_g8902_i0 PRJNA397065 9152 278 1.795181 4.99060318 Trypanosoma brucei 5691 Euglenozoa other_Eukaryota 508 1.26e-139   NTclustered gi|115504310|ref|XM_001218947.1| 185431 g8902 i0 99.64 2.33093525179856 278 1 100 0 1 278 75 352 Trypanosoma brucei brucei TREU927 histone H3, putative (TB927.1.2490), partial mRNA blastn 648 508 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei
15107212 15107212 PRJNA397065_S_NODE_17432_length_167_cov_1.333333_g17182_i0 PRJNA397065 17432 167 1.333333 2.22666611 Trypanosoma 5690 Euglenozoa other_Eukaryota 309 7.53e-80   NTclustered gi|71744001|ref|XM_798378.1| 185431 g17182 i0 100 2 167 0 100 0 1 167 275 109 Trypanosoma brucei brucei TREU927 60S ribosomal protein L35, putative (Tb09.160.0700), partial mRNA blastn 334 309 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei
17657134 17657134 PRJNA397065_S_NODE_18834_length_157_cov_1.453125_g18584_i0 PRJNA397065 18834 157 1.453125 2.28140625 Trypanosoma 5690 Euglenozoa other_Eukaryota 291 2.52e-74   NTclustered gi|62359329|gb|AC099045.21| 5691 g18584 i0 100 6 157 0 100 0 1 157 57 213 Trypanosoma brucei chromosome 8 clone RPCI93-29O9, complete sequence blastn 942 291 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei
17657420 17657420 PRJNA397065_S_NODE_8474_length_295_cov_4.699248_g8224_i0 PRJNA397065 8474 295 4.699248 13.8627816 Trypanosoma 5690 Euglenozoa other_Eukaryota 545 1.03e-150   NTclustered gi|162190|gb|M38222.1|TRBPARPAB 5691 g8224 i0 100 20.8779661016949 295 0 100 0 1 295 1693 1399 T.brucei procyclic acidic repetitive protein (PARP) genes, complete cds and 5' end blastn 6159 545 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei
21481253 21481253 PRJNA397065_S_NODE_19737_length_151_cov_2.245902_g19487_i0 PRJNA397065 19737 151 2.245902 3.39131202 Trypanosoma 5690 Euglenozoa other_Eukaryota 278 1.87e-70   NTclustered gi|62360155|gb|AC116668.6| 5691 g19487 i0 100 19.3509933774834 150 0 99 0 1 150 86388 86239 Trypanosoma brucei chromosome 5 clone RPCI93-45E22, complete sequence blastn 2922 278 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei
23364094 23364094 PRJNA397065_S_NODE_18539_length_159_cov_1.353846_g18289_i0 PRJNA397065 18539 159 1.353846 2.15261514 Trypanosoma brucei 5691 Euglenozoa other_Eukaryota 289 9.22e-74   NTclustered gi|787997391|ref|XM_011773131.1| 679716 g18289 i0 99.371 6 159 1 100 0 1 159 1417 1575 Trypanosoma brucei gambiense DAL972 pteridine transporter, putative partial mRNA blastn 954 289 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei
25305641 25305641 PRJNA397065_S_NODE_17700_length_165_cov_1.036765_g17450_i0 PRJNA397065 17700 165 1.036765 1.71066225 Trypanosoma 5690 Euglenozoa other_Eukaryota 305 9.59e-79   NTclustered gi|2785781728|ref|XM_067222318.1| 5694 g17450 i0 100 3 165 0 100 0 1 165 198 362 Trypanosoma equiperdum 60S ribosomal protein L32, putative (TEOVI_000709700), partial mRNA blastn 495 305 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma equiperdum
26980404 26980404 PRJNA397065_S_NODE_17002_length_170_cov_2.000000_g16752_i0 PRJNA397065 17002 170 2 3.4 Trypanosoma brucei equiperdum 630700 Euglenozoa other_Eukaryota 115 8.499999999999998e-32   NR RHW67217.1 630700 g16752 i0 100 0.988235294117647 56 0 98.8 0 1 168 36 91 RHW67217.1 Ribosomal protein S10p/S20e [Trypanosoma brucei equiperdum] diamond 168 115 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;