RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA396510", tax_phylum = "Chloroflexota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA396510 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28243762 28243762 PRJNA396510_P_NODE_11306_length_180_cov_1.053435_g11237_i0 PRJNA396510 11306 180 1.053435 1.896183 Anaerolineae bacterium 2052143 Bacteria Bacteria 40.8 0.0245   NR NIV31772.1 2052143 g11237 i0 43.8 0.8 48 25 80 1 10 153 37 82 NIV31772.1 hypothetical protein [Anaerolineae bacterium] diamond 144 40.8 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
29949062 29949062 PRJNA396510_P_NODE_13351_length_167_cov_0.864407_g13282_i0 PRJNA396510 13351 167 0.864407 1.44355969 Chloroflexia bacterium 2448782 Bacteria Bacteria 107 2.65e-25   NR MBA3275463.1 2448782 g13282 i0 94.5 6.89820359281437 55 3 98.8 0 166 2 265 319 MBA3275463.1 succinate dehydrogenase flavoprotein subunit [Chloroflexia bacterium] diamond 1152 107 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;