contig_metadata
8 rows where bioproject = "PRJNA395690" and tax_phylum = "Tubulinea"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 411844 | 411844 | PRJNA395690_P_NODE_881_length_833_cov_4.489796_g764_i0 | PRJNA395690 | 881 | 833 | 4.489796 | 37.40000068 | Cryptodifflugia operculata | 1078836 | Tubulinea | other_Eukaryota | 1109 | 0 | NTclustered | gi|2651357777|gb|PP174294.1| | 1078836 | g764 | i0 | 90.67 | 38.5042016806723 | 836 | 75 | 100 | 1 | 1 | 833 | 3075 | 2240 | Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence | blastn | 32074 | 1109 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Arcellinida | Cryptodifflugiidae | Cryptodifflugia | Cryptodifflugia operculata | ||
| 1686647 | 1686647 | PRJNA395690_P_NODE_5622_length_338_cov_2.159170_g5472_i0 | PRJNA395690 | 5622 | 338 | 2.15917 | 7.2979946 | Nebela tincta | 318538 | Tubulinea | other_Eukaryota | 130 | 1.43e-25 | NTclustered | gi|410369741|gb|JX682597.1| | 318538 | g5472 | i0 | 75.655 | 27.7810650887574 | 267 | 61 | 79 | 4 | 1 | 267 | 61 | 323 | Nebela tincta isolate tin62 cytochrome oxidase subunit 1-like (COI) gene, partial sequence; mitochondrial | blastn | 9390 | 130 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Arcellinida | Hyalospheniidae | Nebela | Nebela tincta | ||
| 7456824 | 7456824 | PRJNA395690_P_NODE_10066_length_256_cov_1.850242_g9914_i0 | PRJNA395690 | 10066 | 256 | 1.850242 | 4.73661952 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 457 | 4.22e-124 | NTclustered | gi|300078496|gb|GU001158.1| | 5778 | g9914 | i0 | 98.828 | 29.8671875 | 256 | 3 | 100 | 0 | 1 | 256 | 922 | 1177 | Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | blastn | 7646 | 457 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 14440310 | 14440310 | PRJNA395690_P_NODE_12172_length_233_cov_9.097826_g12020_i0 | PRJNA395690 | 12172 | 233 | 9.097826 | 21.19793458 | Cryptodifflugia operculata | 1078836 | Tubulinea | other_Eukaryota | 331 | 2.39e-86 | NTclustered | gi|2651357777|gb|PP174294.1| | 1078836 | g12020 | i0 | 92.275 | 1 | 233 | 18 | 100 | 0 | 1 | 233 | 4307 | 4075 | Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence | blastn | 233 | 331 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Arcellinida | Cryptodifflugiidae | Cryptodifflugia | Cryptodifflugia operculata | ||
| 15106753 | 15106753 | PRJNA395690_P_NODE_31652_length_164_cov_1.895652_g31500_i0 | PRJNA395690 | 31652 | 164 | 1.895652 | 3.10886928 | Arcella hemisphaerica | 497998 | Tubulinea | other_Eukaryota | 92.4 | 1.3e-21 | NR | AFX73089.1 | 497998 | g31500 | i0 | 74.5 | 8.61585365853658 | 51 | 13 | 93.3 | 0 | 162 | 10 | 46 | 96 | AFX73089.1 elongation factor 2 alpha, partial [Arcella hemisphaerica] | diamond | 1413 | 92.4 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Arcellinida | Arcellidae | Arcella | Arcella hemisphaerica | ||
| 16988950 | 16988950 | PRJNA395690_P_NODE_14514_length_213_cov_47.670732_g14362_i0 | PRJNA395690 | 14514 | 213 | 47.670732 | 101.53865916 | Cryptodifflugia operculata | 1078836 | Tubulinea | other_Eukaryota | 270 | 4.75e-68 | NTclustered | gi|2651357777|gb|PP174294.1| | 1078836 | g14362 | i0 | 97.468 | 73.2488262910798 | 158 | 4 | 74 | 0 | 46 | 203 | 1675 | 1832 | Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence | blastn | 15602 | 270 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Arcellinida | Cryptodifflugiidae | Cryptodifflugia | Cryptodifflugia operculata | ||
| 18263240 | 18263240 | PRJNA395690_P_NODE_21235_length_184_cov_1.096296_g21083_i0 | PRJNA395690 | 21235 | 184 | 1.096296 | 2.01718464 | Cryptodifflugia oviformis | 1165352 | Tubulinea | other_Eukaryota | 283 | 5.11e-72 | NTclustered | gi|2517949732|gb|OR125031.1| | 1165352 | g21083 | i0 | 94.565 | 31.0217391304348 | 184 | 9 | 100 | 1 | 1 | 184 | 884 | 702 | Cryptodifflugia oviformis isolate strain_6 small subunit ribosomal RNA gene, partial sequence | blastn | 5708 | 283 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Arcellinida | Cryptodifflugiidae | Cryptodifflugia | Cryptodifflugia oviformis | ||
| 23363858 | 23363858 | PRJNA395690_P_NODE_35099_length_162_cov_0.902655_g34947_i0 | PRJNA395690 | 35099 | 162 | 0.902655 | 1.4623011 | Ptolemeba bulliensis | 1525729 | Tubulinea | other_Eukaryota | 76.8 | 8e-10 | NTclustered | gi|1255287463|dbj|LC272071.1| | 1525729 | g34947 | i0 | 86.957 | 0.425925925925926 | 69 | 7 | 43 | 1 | 42 | 110 | 965 | 899 | Ptolemeba bulliensis gene for 18S ribosomal RNA, partial sequence, strain: ATCC 50249 | blastn | 69 | 76.8 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Ptolemeba | Ptolemeba bulliensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;