RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA395690", tax_phylum = "Thermoplasmatota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 1 ✖

tax_phylum 1

  • Thermoplasmatota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA395690 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26617283 26617283 PRJNA395690_P_NODE_19901_length_187_cov_1.202899_g19749_i0 PRJNA395690 19901 187 1.202899 2.24942113 root 1 Root_unresolved Root_unresolved 45.8 6.21e-4   NR RLF65657.1 1906666 g19749 i0 60.6 1.09090909090909 33 13 52.9 0 6 104 115 147 RLF65657.1 MAG: hypothetical protein DRN30_03585 [Thermoplasmata archaeon] diamond 204 46.2 0.991341991341991 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;