RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA395690" and tax_phylum = "Rhodothermota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA395690 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11890462 11890462 PRJNA395690_P_NODE_23390_length_178_cov_2.193798_g23238_i0 PRJNA395690 23390 178 2.193798 3.90496044 Rhodocaloribacter litoris 2558931 Bacteria Bacteria 134 5.23e-27   NTclustered gi|2076465437|gb|CP076718.1| 2558931 g23238 i0 82.278 32.3539325842697 158 25 88 3 23 178 1215833 1215677 Rhodocaloribacter litoris strain ISCAR-4553 chromosome blastn 5759 134 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rhodothermaceae Rhodocaloribacter Rhodocaloribacter litoris
30580687 30580687 PRJNA395690_P_NODE_5473_length_342_cov_1.740614_g5323_i0 PRJNA395690 5473 342 1.740614 5.95289988 Rhodothermales bacterium 2306054 Bacteria Bacteria 99 6.76e-23   NR HMB89964.1 2306054 g5323 i0 61 4.19298245614035 82 29 71.1 2 98 340 5 84 HMB89964.1 7-cyano-7-deazaguanine synthase QueC [Rhodothermales bacterium] diamond 1434 99 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;