contig_metadata
13 rows where bioproject = "PRJNA395690", tax_phylum = "Nitrospirota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11890317 | 11890317 | PRJNA395690_P_NODE_12210_length_233_cov_1.592391_g12058_i0 | PRJNA395690 | 12210 | 233 | 1.592391 | 3.71027103 | Candidatus Manganitrophus sp. | 2927580 | Bacteria | Bacteria | 65.8 | 2.68e-6 | NTclustered | gi|2449729286|gb|CP114553.1| | 2927580 | g12058 | i0 | 100 | 0.583690987124464 | 35 | 0 | 15 | 0 | 59 | 93 | 2713777 | 2713811 | MAG: Candidatus Manganitrophus sp. isolate GAC1 chromosome, complete genome | blastn | 136 | 65.8 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Candidatus Troglogloeales | Candidatus Manganitrophaceae | Candidatus Manganitrophus | Candidatus Manganitrophus sp. | ||
| 22755883 | 22755883 | PRJNA395690_P_NODE_13838_length_219_cov_0.900000_g13686_i0 | PRJNA395690 | 13838 | 219 | 0.9 | 1.971 | Bacteria | 2 | Bacteria | Bacteria | 115 | 2.44e-21 | NTclustered | gi|298571308|gb|HM454279.1| | 798576 | g13686 | i0 | 76.889 | 52.8219178082192 | 225 | 38 | 100 | 13 | 1 | 219 | 6337 | 6121 | Uncultured Nitrospirae bacterium MY2-1F genomic sequence | blastn | 11568 | 115 | 1 | Bacteria | Pseudomonadati | Nitrospirota | uncultured Nitrospirae bacterium MY2-1F | ||||||
| 23363600 | 23363600 | PRJNA395690_P_NODE_15039_length_209_cov_2.550000_g14887_i0 | PRJNA395690 | 15039 | 209 | 2.55 | 5.3295 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 84.2 | 6.5e-12 | NTclustered | gi|2108317525|gb|CP070669.1| | 2026887 | g14887 | i0 | 90.625 | 22.5263157894737 | 64 | 4 | 31 | 2 | 37 | 100 | 568012 | 568073 | MAG: Nitrospirae bacterium isolate bin746 chromosome | blastn | 4708 | 84.2 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 26632193 | 26632193 | PRJNA395690_P_NODE_26101_length_172_cov_1.479675_g25949_i0 | PRJNA395690 | 26101 | 172 | 1.479675 | 2.545041 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 110 | 2.3e-27 | NR | MFO0701275.1 | 70125 | g25949 | i0 | 100 | 0.976744186046512 | 56 | 0 | 97.7 | 0 | 3 | 170 | 230 | 285 | MFO0701275.1 SGNH/GDSL hydrolase family protein [Nitrospira sp.] | diamond | 168 | 110 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 26822328 | 26822328 | PRJNA395690_P_NODE_12921_length_226_cov_2.666667_g12769_i0 | PRJNA395690 | 12921 | 226 | 2.666667 | 6.02666742 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 45.1 | 5.35e-4 | NR | MCL5954451.1 | 2026887 | g12769 | i0 | 52.2 | 0.610619469026549 | 46 | 22 | 61.1 | 0 | 174 | 37 | 10 | 55 | MCL5954451.1 hypothetical protein [Nitrospirota bacterium] | diamond | 138 | 45.1 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 27106789 | 27106789 | PRJNA395690_P_NODE_2162_length_528_cov_1.098121_g2015_i0 | PRJNA395690 | 2162 | 528 | 1.098121 | 5.79807888 | Nitrospiraceae bacterium | 2026770 | Bacteria | Bacteria | 79 | 1.78e-14 | NR | MBX9660795.1 | 2026770 | g2015 | i0 | 35 | 2.41477272727273 | 103 | 67 | 58.5 | 0 | 483 | 175 | 99 | 201 | MBX9660795.1 hypothetical protein [Nitrospiraceae bacterium] | diamond | 1275 | 79 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospiraceae bacterium | |||
| 27864890 | 27864890 | PRJNA395690_P_NODE_29525_length_166_cov_0.871795_g29373_i0 | PRJNA395690 | 29525 | 166 | 0.871795 | 1.4471797 | Nitrospirales bacterium | 2358460 | Bacteria | Bacteria | 45.8 | 2.3e-4 | NR | MFI5222681.1 | 2358460 | g29373 | i0 | 46.5 | 0.77710843373494 | 43 | 23 | 77.7 | 0 | 13 | 141 | 10 | 52 | MFI5222681.1 hypothetical protein [Nitrospirales bacterium] | diamond | 129 | 45.8 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospirales bacterium | ||||
| 28686232 | 28686232 | PRJNA395690_P_NODE_8367_length_279_cov_2.217391_g8215_i0 | PRJNA395690 | 8367 | 279 | 2.217391 | 6.18652089 | Nitrospirales bacterium | 2358460 | Bacteria | Bacteria | 41.6 | 0.046 | NR | MFI5248028.1 | 2358460 | g8215 | i0 | 44 | 0.537634408602151 | 50 | 24 | 53.8 | 1 | 128 | 277 | 1 | 46 | MFI5248028.1 hypothetical protein [Nitrospirales bacterium] | diamond | 150 | 41.6 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospirales bacterium | ||||
| 29949039 | 29949039 | PRJNA395690_P_NODE_25551_length_173_cov_1.637097_g25399_i0 | PRJNA395690 | 25551 | 173 | 1.637097 | 2.83217781 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 52 | 6.5e-6 | NR | MCE3222851.1 | 70125 | g25399 | i0 | 51.2 | 3.06936416184971 | 43 | 21 | 74.6 | 0 | 21 | 149 | 59 | 101 | MCE3222851.1 hypothetical protein [Nitrospira sp.] | diamond | 531 | 52 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 30029036 | 30029036 | PRJNA395690_P_NODE_29551_length_166_cov_0.871795_g29399_i0 | PRJNA395690 | 29551 | 166 | 0.871795 | 1.4471797 | root | 1 | Root_unresolved | Root_unresolved | 57.8 | 6.63e-8 | NR | RJR19142.1 | 2026770 | g29399 | i0 | 52.1 | 2.80120481927711 | 48 | 19 | 79.5 | 1 | 133 | 2 | 1370 | 1417 | RJR19142.1 MAG: hypothetical protein C4581_05430 [Nitrospiraceae bacterium] | diamond | 465 | 58.2 | 0.993127147766323 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospiraceae bacterium | |||
| 32020401 | 32020401 | PRJNA395690_P_NODE_18358_length_190_cov_1.758865_g18206_i0 | PRJNA395690 | 18358 | 190 | 1.758865 | 3.3418435 | Bacteria | 2 | Bacteria | Bacteria | 65.9 | 1.3e-10 | NR | MFO0697880.1 | 70125 | g18206 | i0 | 53.2 | 3.75789473684211 | 62 | 27 | 97.9 | 1 | 4 | 189 | 168 | 227 | MFO0697880.1 tetratricopeptide repeat protein [Nitrospira sp.] | diamond | 714 | 66.2 | 0.995468277945619 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 32305429 | 32305429 | PRJNA395690_P_NODE_36299_length_161_cov_0.910714_g36147_i0 | PRJNA395690 | 36299 | 161 | 0.910714 | 1.46624954 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 89 | 1.46e-19 | NR | HNL89580.1 | 70125 | g36147 | i0 | 84.9 | 1.97515527950311 | 53 | 8 | 98.8 | 0 | 3 | 161 | 184 | 236 | HNL89580.1 HAD family hydrolase [Nitrospira sp.] | diamond | 318 | 89 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 32368659 | 32368659 | PRJNA395690_P_NODE_9199_length_268_cov_1.630137_g9047_i0 | PRJNA395690 | 9199 | 268 | 1.630137 | 4.36876716 | Nitrospira | 1234 | Bacteria | Bacteria | 70.9 | 3.49e-13 | NR | MEQ1795070.1 | 70125 | g9047 | i0 | 41.9 | 1.92537313432836 | 86 | 49 | 96.3 | 1 | 7 | 264 | 34 | 118 | MEQ1795070.1 hypothetical protein [Nitrospira sp.] | diamond | 516 | 70.9 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;