RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA395690", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA395690 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26822337 26822337 PRJNA395690_P_NODE_19101_length_189_cov_1.092857_g18949_i0 PRJNA395690 19101 189 1.092857 2.06549973 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 85.5 6.64e-18   NR HJR46673.1 2169593 g18949 i0 82.6 0.73015873015873 46 8 73 0 187 50 290 335 HJR46673.1 site-specific integrase [Nitrososphaeraceae archaeon] diamond 138 85.5 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
32288703 32288703 PRJNA395690_P_NODE_17519_length_194_cov_1.055172_g17367_i0 PRJNA395690 17519 194 1.055172 2.04703368 Nitrososphaera sp. 1971748 Archaea Archaea 43.9 0.00713   NR MCI0559036.1 1971748 g17367 i0 44.6 1.00515463917526 65 31 99 3 3 194 98 158 MCI0559036.1 hypothetical protein [Nitrososphaera sp.] diamond 195 43.9 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;