RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA395690", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Kitrinoviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA395690 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18263119 18263119 PRJNA395690_P_NODE_12535_length_230_cov_1.690608_g12383_i0 PRJNA395690 12535 230 1.6906080000000001 3.8883984 Ripothoz virus 3131336 Viruses Viruses 78.7 3.39e-10   NTclustered gi|2717322249|gb|PP173638.1| 3131336 g12383 i0 92.593 30.4086956521739 54 4 23 0 2 55 5383 5436 MAG: Ripothoz virus isolate MP3_k141_314104 genomic sequence blastn 6994 78.7 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales     Ripothoz virus
30138171 30138171 PRJNA395690_P_NODE_19612_length_187_cov_2.188406_g19460_i0 PRJNA395690 19612 187 2.188406 4.09231922 Tombusviridae sp. 2583950 Viruses Viruses 63.2 9.43e-10   NR USC30238.1 2583950 g19460 i0 59.6 2.66310160427807 52 20 81.8 1 9 161 82 133 USC30238.1 MAG: putative RNA dependent RNA polymerase, partial [Tombusviridae sp.] diamond 498 63.2 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Tombusviridae sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;